Paper · 2006 · Phytopathology

Effects of Different 3-Year Cropping Systems on Soil Microbial Communities and Rhizoctonia Diseases of Potato

Robert P. Larkin; C. Wayne Honeycutt

13
claims
19
verbatim quotes
216
citations
2
research areas
—
Not open access

Abstract

ABSTRACT Eight different 3-year cropping systems, consisting of soybean-canola, soybean-barley, sweet corn-canola, sweet corn-soybean, green bean-sweet corn, canola-sweet corn, barley-clover, and continuous potato (non-rotation control) followed by potato as the third crop in all systems, were established in replicated field plots with two rotation entry points in Presque Isle, ME, in 1998. Cropping system effects on soil microbial community characteristics based on culturable soil microbial populations, single carbon source substrate utilization (SU) profiles, and whole-soil fatty acid methyl ester (FAME) profiles were evaluated in association with the development of soilborne diseases of potato in the 2000 and 2001 field seasons. Soil populations of culturable bacteria and overall microbial activity were highest following barley, canola, and sweet corn crops, and lowest following continuous potato. The SU profiles derived from BIOLOG ECO plates indicated higher substrate richness and diversity and greater utilization of certain carbohydrates, carboxylic acids, and amino acids associated with barley, canola, and some sweet corn rotations, indicating distinct differences in functional attributes of microbial communities among cropping systems. Soil FAME profiles also demonstrated distinct differences among cropping systems in their relative composition of fatty acid types and classes, representing structural attributes of microbial communities. Fatty acids most responsible for differentiation among cropping systems included 12:0, 16:1 omega5c, 16:1 omega7c, 18:1 omega9c, and 18:2omega6c. Based on FAME biomarkers, barley rotations resulted in higher fungi-to-bacteria ratios, sweet corn resulted in greater mycorrhizae populations, and continuous potato produced the lowest amounts of these and other biomarker traits. Incidence and severity of stem and stolon canker and black scurf of potato, caused by Rhizoctonia solani, were reduced for most rotations relative to the continuous potato control. Potato crops following canola, barley, or sweet corn provided the lowest levels of Rhizoctonia disease and best tuber quality, whereas potato crops following clover or soybean resulted in disease problems in some years. Both rotation crop and cropping sequence were important in shaping the microbial characteristics, soilborne disease, and tuber qualities. Several microbial parameters, including microbial populations and SU and FAME profile characteristics, were correlated with potato disease or yield measurements in one or both harvest years. In this study, we have demonstrated distinctive effects of specific rotation crops and cropping sequences on microbial communities and have begun to relate the implications of these changes to crop health and productivity.

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Claims 13

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Culturable bacteria and microbial activity were highest after barley, canola and sweet corn, and lowest after continuous potato.

Treatment
barley, canola, and sweet corn cropse0
Outcome
Soil populations of culturable bacteria and overall microbial activitye0
Direction
higheste0
Comparator
continuous potatoe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Soil populations of culturable bacteria and overall microbial activity were highest following barley, canola, and sweet corn crops, and lowest following continuous potato”

✓ located verbatim in the source · abstract, characters 742–912 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Barley, canola and some sweet corn rotations showed higher substrate richness, diversity and utilization.

Treatment
barley, canola, and some sweet corn rotationse0
Outcome
substrate richness and diversity and greater utilizatione0
Direction
highere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“higher substrate richness and diversity and greater utilization of certain carbohydrates, carboxylic acids, and amino acids associated with barley, canola, and some sweet corn rotations”

✓ located verbatim in the source · abstract, characters 971–1156 · show in text ↑
t0

“Potato”

✓ located verbatim in the source · title, characters 103–109 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Soil FAME profiles differed in fatty acid composition among cropping systems.

Outcome
relative composition of fatty acid types and classese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Soil FAME profiles also demonstrated distinct differences among cropping systems in their relative composition of fatty acid types and classes”

✓ located verbatim in the source · abstract, characters 1264–1406 · show in text ↑
t0

“Potato”

✓ located verbatim in the source · title, characters 103–109 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Five fatty acids were chiefly responsible for differentiation among cropping systems.

Outcome
Fatty acids most responsible for differentiation among cropping systemse0
Qualifier
12:0, 16:1 omega5c, 16:1 omega7c, 18:1 omega9c, and 18:2omega6ce0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Fatty acids most responsible for differentiation among cropping systems included 12:0, 16:1 omega5c, 16:1 omega7c, 18:1 omega9c, and 18:2omega6c”

✓ located verbatim in the source · abstract, characters 1469–1613 · show in text ↑
t0

“Potato”

✓ located verbatim in the source · title, characters 103–109 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Barley rotations had higher fungi-to-bacteria ratios.

Treatment
barley rotationse0
Outcome
fungi-to-bacteria ratiose0
Direction
highere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“barley rotations resulted in higher fungi-to-bacteria ratios”

✓ located verbatim in the source · abstract, characters 1641–1701 · show in text ↑
t0

“potato”

✓ located after whitespace/quote normalisation · title, characters 103–109 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Sweet corn rotations had greater mycorrhizae populations.

Treatment
sweet corne0
Interactor
mycorrhizaee0symbiont
Outcome
mycorrhizae populationse0
Direction
greatere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“sweet corn resulted in greater mycorrhizae populations”

✓ located verbatim in the source · abstract, characters 1703–1757 · show in text ↑
t0

“potato”

✓ located after whitespace/quote normalisation · title, characters 103–109 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Continuous potato had the lowest amounts of fungi-to-bacteria and mycorrhizae biomarker traits.

Treatment
continuous potatoe0
Outcome
biomarker traitse0
Direction
loweste0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“continuous potato produced the lowest amounts of these and other biomarker traits”

✓ located verbatim in the source · abstract, characters 1763–1844 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Most rotations reduced incidence and severity of potato stem and stolon canker and black scurf versus continuous potato.

Treatment
most rotationse0
Interactor
Rhizoctonia solaniRhizoctonia solanie0pathogen
Outcome
Incidence and severity of stem and stolon canker and black scurfe0
Direction
reducede0
Comparator
continuous potato controle0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Rhizoctonia solani
Rhizoctonia solani · Interactoranonimowy, niektóre prawa zastrzeżone (CC BY) · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“Incidence and severity of stem and stolon canker and black scurf of potato, caused by Rhizoctonia solani, were reduced for most rotations relative to the continuous potato control”

✓ located verbatim in the source · abstract, characters 1846–2025 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Canola, barley or sweet corn preceding potato gave the lowest Rhizoctonia disease.

Treatment
canola, barley, or sweet corne0
Interactor
RhizoctoniaRhizoctoniae0pathogen
Outcome
Rhizoctonia diseasee0
Direction
loweste0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Rhizoctonia
Rhizoctonia · Interactor · picture from its Wikimedia Commons categoryTashkoskip · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Potato crops following canola, barley, or sweet corn provided the lowest levels of Rhizoctonia disease”

✓ located verbatim in the source · abstract, characters 2027–2129 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Canola, barley or sweet corn preceding potato gave the best tuber quality.

Treatment
canola, barley, or sweet corne0
Outcome
tuber qualitye0
Direction
beste0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Potato crops following canola, barley, or sweet corn provided the lowest levels of Rhizoctonia disease and best tuber quality”

✓ located verbatim in the source · abstract, characters 2027–2152 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Clover or soybean preceding potato resulted in disease problems in some years.

Treatment
clover or soybeane0
Outcome
disease problemse0
Qualifier
in some yearse0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“potato crops following clover or soybean resulted in disease problems in some years”

✓ located verbatim in the source · abstract, characters 2162–2245 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Rotation crop and sequence shaped microbial characteristics, soilborne disease and tuber qualities.

Treatment
rotation crop and cropping sequencee0
Outcome
microbial characteristics, soilborne disease, and tuber qualitiese0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Both rotation crop and cropping sequence were important in shaping the microbial characteristics, soilborne disease, and tuber qualities”

✓ located verbatim in the source · abstract, characters 2247–2383 · show in text ↑
t0

“potato”

✓ located after whitespace/quote normalisation · title, characters 103–109 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Microbial population and SU and FAME profiles correlated with potato disease or yield measurements in one or both years.

Outcome
potato disease or yield measurementse0
Qualifier
microbial populations and SU and FAME profile characteristicse0
Setting
one or both harvest yearse0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Several microbial parameters, including microbial populations and SU and FAME profile characteristics, were correlated with potato disease or yield measurements in one or both harvest years”

✓ located verbatim in the source · abstract, characters 2385–2574 · show in text ↑

Zea mays subsp. mays · pest · Solanum tuberosum (potato)Positive and negative results

3 papers: 2 positive, 1 negative or no effect

1 paper in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
See all 3 papers →

Hordeum vulgare · quality: general · Solanum tuberosum (potato)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

rotation · molecular: metabolites · Solanum tuberosum (potato)Results agree

4 papers: 0 positive, 4 negative or no effect

3 papers in the same direction as this paper

  1. negative
  2. negative
  3. no effect
See all 4 papers →

rotation · Rhizoctonia solani · Solanum tuberosum (potato)Results agree

5 papers: 5 positive, 0 negative or no effect

4 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

1 paper more in this group

See all 5 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.