Paper · 2014 · BMC Plant Biology

The peach volatilome modularity is reflected at the genetic and environmental response levels in a QTL mapping population

Gerardo Sánchez; José Martínez; José Romeu; et al.

6
claims
10
verbatim quotes
45
citations
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Open access · cc-by

Abstract

BACKGROUND: The improvement of fruit aroma is currently one of the most sought-after objectives in peach breeding programs. To better characterize and assess the genetic potential for increasing aroma quality by breeding, a quantity trait locus (QTL) analysis approach was carried out in an F1 population segregating largely for fruit traits. RESULTS: Linkage maps were constructed using the IPSC peach 9 K Infinium ® II array, rendering dense genetic maps, except in the case of certain chromosomes, probably due to identity-by-descent of those chromosomes in the parental genotypes. The variability in compounds associated with aroma was analyzed by a metabolomic approach based on GC-MS to profile 81 volatiles across the population from two locations. Quality-related traits were also studied to assess possible pleiotropic effects. Correlation-based analysis of the volatile dataset revealed that the peach volatilome is organized into modules formed by compounds from the same biosynthetic origin or which share similar chemical structures. QTL mapping showed clustering of volatile QTL included in the same volatile modules, indicating that some are subjected to joint genetic control. The monoterpene module is controlled by a unique locus at the top of LG4, a locus previously shown to affect the levels of two terpenoid compounds. At the bottom of LG4, a locus controlling several volatiles but also melting/non-melting and maturity-related traits was found, suggesting putative pleiotropic effects. In addition, two novel loci controlling lactones and esters in linkage groups 5 and 6 were discovered. CONCLUSIONS: The results presented here give light on the mode of inheritance of the peach volatilome confirming previously loci controlling the aroma of peach but also identifying novel ones.

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Claims 6

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Peach linkage maps were dense except for certain chromosomes.

Outcome
genetic mapse0
Comparator
certain chromosomese0

Verbatim

e0

“rendering dense genetic maps, except in the case of certain chromosomes”

✓ located verbatim in the source · abstract, characters 428–499 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Peach aroma volatiles formed chemical and biosynthetic modules.

Compound
compounds from the same biosynthetic origine0
Outcome
volatilome is organized into modulese0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Prunus persica
Prunus persica · TaxonAllagash Brewing · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“the peach volatilome is organized into modules formed by compounds from the same biosynthetic origin or which share similar chemical structures”

✓ located verbatim in the source · abstract, characters 902–1045 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

QTL for volatiles in the same modules clustered.

Gene
volatile QTLe0
Outcome
clustering of volatile QTLe0

Not reportedTaxonDirection

Verbatim

e0

“clustering of volatile QTL included in the same volatile modules”

✓ located verbatim in the source · abstract, characters 1066–1130 · show in text ↑
t0

“peach”

✓ located verbatim in the source · title, characters 4–9 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A locus at the top of LG4 controlled the monoterpene module.

Gene
unique locus at the top of LG4e0
Outcome
monoterpene modulee0

Not reportedTaxonDirection

Verbatim

e0

“The monoterpene module is controlled by a unique locus at the top of LG4”

✓ located verbatim in the source · abstract, characters 1193–1265 · show in text ↑
t0

“peach”

✓ located verbatim in the source · title, characters 4–9 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A locus at the bottom of LG4 controlled several volatiles and maturity traits.

Gene
a locuse0
Outcome
several volatiles but also melting/non-melting and maturity-related traitse0

Not reportedTaxonDirection

Verbatim

e0

“At the bottom of LG4, a locus controlling several volatiles but also melting/non-melting and maturity-related traits was found”

✓ located verbatim in the source · abstract, characters 1341–1467 · show in text ↑
t0

“peach”

✓ located verbatim in the source · title, characters 4–9 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Novel loci controlling lactones and esters were found in LG5 and LG6.

Gene
two novel locie0
Outcome
lactones and esterse0

Not reportedTaxonDirection

Verbatim

e0

“two novel loci controlling lactones and esters in linkage groups 5 and 6 were discovered”

✓ located verbatim in the source · abstract, characters 1523–1611 · show in text ↑
t0

“peach”

✓ located verbatim in the source · title, characters 4–9 · show in text ↑