Paper · 2006 · Plant Cell & Environment

Isolation of a novel nodulin: a molecular marker of osmotic stress in Glycine max/Bradyrhizobium japonicum nodule

MATHILDE CLEMENT; ERIC BONCOMPAGNI; JANICE DE ALMEIDA‐ENGLER; et al.

5
claims
10
verbatim quotes
9
citations
3
research areas
✓
Open access

Abstract

Symbiotic N(2) fixation of legume crops is highly sensitive to drought, which results in a dramatic drop of N accumulation and yield. The symbiosis between soybean (Glycine max) and Bradyrhizobium japonicum, because of its extreme sensitivity to drought, was chosen as a model to analyse the response to drought stress at a molecular level. The mRNA differential display technique was performed to isolate cDNA markers differentially expressed in well-watered [100% of N(2) fixation capacity (NFC)] and drought-stressed nodules (40% NFC). One gene noted, G93, appeared strongly down-regulated by drought and fully recovered after rehydration. In situ hybridization showed that G93 transcripts were localized in N(2)-fixing cells of mature nodules, indicating that G93 could be considered as a late nodulin. However, G93 expression was not directly correlated to N(2) fixation but mainly responded to osmotic stress. Other stresses that lead to decrease of N(2) fixation did not affect G93 expression. Sequence analyses showed that G93 presented a strong homology with two soybean expressed sequence tags (ESTs) and with the ZR1 protein of Medicago sativa. Putative roles of this nodulin in adaptation of soybean nodule to osmotic stress are proposed.

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Claims 5

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Drought strongly down-regulated G93 expression, which recovered after rehydration.

Taxon
Glycine maxGlycine maxt0
Treatment
droughte0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Gene
G93e0
Outcome
G93e0
Direction
down-regulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“One gene noted, G93, appeared strongly down-regulated by drought and fully recovered after rehydration.”

✓ located verbatim in the source · abstract, characters 539–642 · show in text ↑
t0

“Glycine max/Bradyrhizobium japonicum nodule”

✓ located verbatim in the source · title, characters 70–113 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

G93 transcripts localized in nitrogen-fixing cells of mature nodules.

Taxon
Glycine maxGlycine maxt0
Organ / stage
mature nodulese0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Gene
G93e0
Outcome
G93 transcripts were localized in N(2)-fixing cellse0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“G93 transcripts were localized in N(2)-fixing cells of mature nodules”

✓ located verbatim in the source · abstract, characters 677–746 · show in text ↑
t0

“Glycine max/Bradyrhizobium japonicum nodule”

✓ located verbatim in the source · title, characters 70–113 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

G93 expression responded mainly to osmotic stress rather than directly tracking nitrogen fixation.

Taxon
Glycine maxGlycine maxt0
Treatment
osmotic stresse0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Gene
G93e0
Outcome
G93 expressione0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“G93 expression was not directly correlated to N(2) fixation but mainly responded to osmotic stress”

✓ located verbatim in the source · abstract, characters 816–914 · show in text ↑
t0

“Glycine max/Bradyrhizobium japonicum nodule”

✓ located verbatim in the source · title, characters 70–113 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Other stresses reducing nitrogen fixation did not affect G93 expression.

Taxon
Glycine maxGlycine maxt0
Treatment
Other stressese0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Gene
G93e0
Outcome
G93 expressione0
Direction
did not affecte0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Other stresses that lead to decrease of N(2) fixation did not affect G93 expression.”

✓ located verbatim in the source · abstract, characters 916–1000 · show in text ↑
t0

“Glycine max/Bradyrhizobium japonicum nodule”

✓ located verbatim in the source · title, characters 70–113 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

G93 showed strong sequence homology to two soybean ESTs and Medicago sativa ZR1 protein.

Taxon
Glycine maxGlycine maxt0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Gene
G93e0
Outcome
strong homologye0
Comparator
two soybean expressed sequence tags (ESTs) and with the ZR1 protein of Medicago sativae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“G93 presented a strong homology with two soybean expressed sequence tags (ESTs) and with the ZR1 protein of Medicago sativa”

✓ located verbatim in the source · abstract, characters 1031–1154 · show in text ↑
t0

“Glycine max/Bradyrhizobium japonicum nodule”

✓ located verbatim in the source · title, characters 70–113 · show in text ↑

drought · Bradyrhizobium japonicum · Glycine max (soybean)Results agree

3 papers: 0 positive, 3 negative or no effect

2 papers in the same direction as this paper

  1. negative
  2. no effect
See all 3 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.