Paper · 2012 · Proceedings of the National Academy of Sciences

A kinetic model of rapidly reversible nonphotochemical quenching

Julia Zaks; Kapil Amarnath; David M. Kramer; et al.

2
claims
4
verbatim quotes
155
citations
2
research areas
✓
Open access

Abstract

Oxygen-evolving photosynthetic organisms possess nonphotochemical quenching (NPQ) pathways that protect against photo-induced damage. The majority of NPQ in plants is regulated on a rapid timescale by changes in the pH of the thylakoid lumen. In order to quantify the rapidly reversible component of NPQ, called qE, we developed a mathematical model of pH-dependent quenching of chlorophyll excitations in Photosystem II. Our expression for qE depends on the protonation of PsbS and the deepoxidation of violaxanthin by violaxanthin deepoxidase. The model is able to simulate the kinetics of qE at low and high light intensities. The simulations suggest that the pH of the lumen, which activates qE, is not itself affected by qE. Our model provides a framework for testing hypothesized qE mechanisms and for assessing the role of qE in improving plant fitness in variable light intensity.

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Claims 2

Method / resourceobservedoriginal resultsimulated

Claim · model-written summary

The model simulated qE kinetics at low and high light intensities.

Taxon
plantsViridiplantaee1
Outcome
kinetics of qEe0
Comparator
low and high light intensitiese0

Verbatim

e0

“The model is able to simulate the kinetics of qE at low and high light intensities.”

✓ located verbatim in the source · abstract, characters 546–629 · show in text ↑
e1

“The majority of NPQ in plants”

✓ located verbatim in the source · abstract, characters 134–163 · show in text ↑
Mechanismauthor interpretationoriginal resultno effectsimulated

Claim · model-written summary

Simulations suggested qE does not itself affect the lumen pH that activates qE.

Taxon
plantsViridiplantaee1
Outcome
pH of the lumene0
Qualifier
not itself affected by qEe0

Verbatim

e0

“The simulations suggest that the pH of the lumen, which activates qE, is not itself affected by qE.”

✓ located verbatim in the source · abstract, characters 630–729 · show in text ↑
e1

“The majority of NPQ in plants”

✓ located verbatim in the source · abstract, characters 134–163 · show in text ↑