Paper · 2014 · Annals of Microbiology

Isolation and characterization of an endophytic bacterium, Bacillus megaterium BMN1, associated with root-nodules of Medicago sativa L. growing in Al-Ahsaa region, Saudi Arabia

Ashraf Y. Z. Khalifa; Mohammed A. Almalki

8
claims
13
verbatim quotes
35
citations
1
research areas
✓
Open access

Abstract

Medicago sativa L. (Alfalfa) is an important forage crop legume in Saudi Arabia due to its high nutritive value and yield. Soil bacteria exist in root or root-nodules of Medicago sativa in either symbiotic relationships or in associations. In the current study, the endophytic bacterium Bacillus megaterium BMN1 was isolated from surface-sterilized root-nodules of Medicago sativa and characterized phenotypically and genotypically. The results indicated that BMN1 consumed a variety of sugars as sole carbon source, and produced catalase and amylase but not urease. BMN1 exhibited some plant growth-promoting traits, such as production of indole acetic acid and acetoin, and solublization of inorganic phosphate. In addition, comparative sequence analysis of the 16S rRNA gene showed that BMN1 exhibited 99 % homology with Bacillus megaterium. In addition, BMN1 could not nodulate alfalfa when re-inoculated but the strain enhanced root growth parameters compared to uninoculated plants. Co-inoculation of BMN1with Sinorhizobium meliloti increased not only the number of nodules formed on roots of alfalfa but also root length and root dry weight under greenhouse conditions. Furthermore, the effects BMN1 inoculation on the growth of Lens esculentus, Phaseolus vulgaris and Pisum sativum were also assessed. The length of the primary root, number of secondary roots and dry weight of roots of the three crop legumes were significantly increased upon inoculation by Bacillus megaterium compared to uninoculated control plants. In conclusion, BMN1 belongs to the group of plant growth promoting rhizobacteria and could have significant agricultural applications.

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Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

Endophytic BMN1 showed plant growth-promoting traits, including indole acetic acid production and inorganic phosphate solubilization.

Taxon
Medicago sativaMedicago sativae0
Interactor
BMN1e1symbiont
Outcome
plant growth-promoting traitse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“isolated from surface-sterilized root-nodules of Medicago sativa”

✓ located verbatim in the source · abstract, characters 316–380 · show in text ↑
e1

“BMN1 exhibited some plant growth-promoting traits, such as production of indole acetic acid and acetoin, and solublization of inorganic phosphate”

✓ located verbatim in the source · abstract, characters 567–712 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Co-inoculation of BMN1 with Sinorhizobium meliloti increased the number of nodules on alfalfa roots.

Taxon
alfalfaMedicago sativae2
Treatment
Co-inoculation of BMN1with Sinorhizobium melilotie2
Interactor
Sinorhizobium melilotiSinorhizobium melilotie2symbiont
Second interactor
BMN1e2symbiont
Outcome
number of nodulese2
Direction
increasede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗
Sinorhizobium meliloti
Sinorhizobium meliloti · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e2

“Co-inoculation of BMN1with Sinorhizobium meliloti increased not only the number of nodules formed on roots of alfalfa”

✓ located verbatim in the source · abstract, characters 989–1106 · show in text ↑
e3

“but also root length and root dry weight under greenhouse conditions”

✓ located verbatim in the source · abstract, characters 1107–1175 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Co-inoculation of BMN1 with Sinorhizobium meliloti increased root length and root dry weight of alfalfa under greenhouse conditions.

Taxon
alfalfaMedicago sativae2
Treatment
Co-inoculation of BMN1with Sinorhizobium melilotie2
Interactor
Sinorhizobium melilotiSinorhizobium melilotie2symbiont
Second interactor
BMN1e2symbiont
Outcome
root length and root dry weighte3
Direction
increasede2
Setting
greenhouse conditionse3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗
Sinorhizobium meliloti
Sinorhizobium meliloti · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e2

“Co-inoculation of BMN1with Sinorhizobium meliloti increased not only the number of nodules formed on roots of alfalfa”

✓ located verbatim in the source · abstract, characters 989–1106 · show in text ↑
e3

“but also root length and root dry weight under greenhouse conditions”

✓ located verbatim in the source · abstract, characters 1107–1175 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Re-inoculated BMN1 enhanced root growth parameters of alfalfa compared with uninoculated plants.

Taxon
alfalfaMedicago sativae4
Treatment
re-inoculatede4
Interactor
BMN1e4symbiont
Outcome
root growth parameterse4
Direction
enhancede4
Comparator
uninoculated plantse4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e4

“BMN1 could not nodulate alfalfa when re-inoculated but the strain enhanced root growth parameters compared to uninoculated plants”

✓ located verbatim in the source · abstract, characters 858–987 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Inoculation with Bacillus megaterium significantly increased the primary root length of three crop legumes.

Taxon
crop legumese5
Treatment
inoculation by Bacillus megateriume5
Interactor
Bacillus megateriumPriestia megateriume5symbiont
Outcome
length of the primary roote5
Direction
significantly increasede5
Comparator
uninoculated control plantse5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Priestia megaterium
Priestia megaterium · InteractorOsmoregulator / Osmoregulator at English Wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e5

“The length of the primary root, number of secondary roots and dry weight of roots of the three crop legumes were significantly increased upon inoculation by Bacillus megaterium compared to uninoculated control plants”

✓ located verbatim in the source · abstract, characters 1310–1526 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

BMN1 could not nodulate alfalfa when re-inoculated.

Taxon
alfalfaMedicago sativae4
Interactor
BMN1e4symbiont
Outcome
nodulatee4
Qualifier
when re-inoculatede4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e4

“BMN1 could not nodulate alfalfa when re-inoculated but the strain enhanced root growth parameters compared to uninoculated plants”

✓ located verbatim in the source · abstract, characters 858–987 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

BMN1 consumed a variety of sugars and produced catalase and amylase but not urease.

Taxon
Medicago sativaMedicago sativae0
Interactor
BMN1e6symbiont
Outcome
produced catalase and amylasee6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“isolated from surface-sterilized root-nodules of Medicago sativa”

✓ located verbatim in the source · abstract, characters 316–380 · show in text ↑
e6

“BMN1 consumed a variety of sugars as sole carbon source, and produced catalase and amylase but not urease”

✓ located verbatim in the source · abstract, characters 460–565 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The 16S rRNA gene of BMN1 showed 99% homology with Bacillus megaterium.

Taxon
Medicago sativaMedicago sativae0
Interactor
BMN1e7symbiont
Outcome
homology with Bacillus megateriume7
Value
99 %e7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Medicago sativa
Medicago sativa · TaxonDrepanostoma · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“isolated from surface-sterilized root-nodules of Medicago sativa”

✓ located verbatim in the source · abstract, characters 316–380 · show in text ↑
e7

“comparative sequence analysis of the 16S rRNA gene showed that BMN1 exhibited 99 % homology with Bacillus megaterium”

✓ located verbatim in the source · abstract, characters 727–843 · show in text ↑

Sinorhizobium meliloti · growth · Medicago sativa (alfalfa)Positive and negative results

10 papers: 9 positive, 1 negative or no effect

8 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

6 papers more in this group

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Sinorhizobium meliloti · symbiosis · Medicago sativa (alfalfa)Positive and negative results

17 papers: 14 positive, 3 negative or no effect

13 papers in the same direction as this paper · 3 in the opposite direction

  1. negative
  2. negative
  3. no effect

13 papers more in this group

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inoculation · symbiosis · Medicago sativa (alfalfa)Positive and negative results

57 papers: 49 positive, 8 negative or no effect

48 papers in the same direction as this paper · 7 in the opposite direction · 1 reporting no difference from an alternative

  1. positive
  2. negative
  3. negative

53 papers more in this group

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inoculation · growth · Medicago sativa (alfalfa)Positive and negative results

137 papers: 121 positive, 16 negative or no effect

120 papers in the same direction as this paper · 15 in the opposite direction · 1 reporting no difference from an alternative

  1. no effect
  2. no effect
  3. no effect

133 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.