Paper · 1977 · Japanese Journal of Phytopathology

Some Properties and Intracellular Appearance of Rice Waika Virus

Shuichi YAMASHITA; Yoji DOI; Kiyoshi YORA

18
claims
36
verbatim quotes
6
citations
2
research areas
✓
Open access

Abstract

Rice waika virus (RWV) was purified by chloroform clarification and three cycles of differential centrifugations followed by sucrose density gradient centrifugation. RWV particles were spherical ones of about 30nm in diameter and showed an UV absorption spectrum characteristic of a nucleoprotein. The sedimentation coeffcient of the virus determined by analytical centrifugation was about 172S. Antiserum with the titer of 1/1, 024 for the agar gel diffusion test was prepared against RWV. By electron microscopy of thin sections, the presence of RWV particles was found to be restricted to phloem cells, in which two types of inclusion bodies and small vesicles were also observed. At the early stage of RWV infection, electron-dense crystalline inclusions showing latticed or tubular structures of protein nature developed, and the virus particles were produced first at their surface, and later within them. As the virus multiplication advanced, the crystalline inclusions changed to become electronlight granular inclusions, another type of inclusion body, which were easily found in RWV-infected cells and always associated with the virus particles. RWV particles gradually increased in number and accumulated as virus aggregates in the granular inclusions. The small vesicles developed around the inclusion bodies, and more often in the cytoplasm along and near the cell lumen. They contained fibrous materials like nucleic acid strands. Subsequently the virus particles were released from the inclusion bodies into the cytoplasm and vacuoles. From these observations the inclusion bodies were thought to be viroplasms. The virus particles in vacuoles often showed crystalline arrays. Phloem necrosis was very common, and accumulation of starch grains due to the phloem necrosis was often observed in chloroplasts in mesophyll cells.

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Claims 18

Observationobservedoriginal resultmeasured

Claim · model-written summary

Rice waika virus particles were spherical and about 30 nm across.

Interactor
RWVe0pathogen
Outcome
RWV particlese0
Value
about 30nme0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“RWV particles were spherical ones of about 30nm in diameter”

✓ located verbatim in the source · abstract, characters 166–225 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The virus had a nucleoprotein-like UV absorption spectrum.

Outcome
UV absorption spectrume0
Qualifier
characteristic of a nucleoproteine0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“showed an UV absorption spectrum characteristic of a nucleoprotein”

✓ located verbatim in the source · abstract, characters 230–296 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The virus sedimentation coefficient was about 172S.

Outcome
sedimentation coeffciente0
Value
about 172Se0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The sedimentation coeffcient of the virus determined by analytical centrifugation was about 172S”

✓ located verbatim in the source · abstract, characters 298–394 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Antiserum to rice waika virus had a titer of 1/1,024 in an agar-gel diffusion test.

Outcome
titere0
Value
1/1, 024e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Antiserum with the titer of 1/1, 024 for the agar gel diffusion test was prepared against RWV”

✓ located verbatim in the source · abstract, characters 396–489 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Virus particles were restricted to phloem cells.

Organ / stage
phloem cellse0
Interactor
RWVe0pathogen
Outcome
presence of RWV particlese0
Direction
restrictede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the presence of RWV particles was found to be restricted to phloem cells”

✓ located verbatim in the source · abstract, characters 532–604 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Two types of inclusion bodies and small vesicles appeared in infected phloem cells.

Organ / stage
phloem cellse0
Outcome
two types of inclusion bodies and small vesiclese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“phloem cells, in which two types of inclusion bodies and small vesicles were also observed”

✓ located verbatim in the source · abstract, characters 592–682 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Early infection produced crystalline inclusions with latticed or tubular protein structures.

Outcome
electron-dense crystalline inclusionse0
Qualifier
early stage of RWV infectione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“At the early stage of RWV infection, electron-dense crystalline inclusions showing latticed or tubular structures of protein nature developed”

✓ located verbatim in the source · abstract, characters 684–825 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Virus particles first formed at the surface of crystalline inclusions and later within them.

Outcome
virus particlese0
Qualifier
first at their surface, and later within theme0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“the virus particles were produced first at their surface, and later within them”

✓ located verbatim in the source · abstract, characters 831–910 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

With advancing multiplication, crystalline inclusions became electron-light granular inclusions.

Outcome
crystalline inclusionse0
Direction
changede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“As the virus multiplication advanced, the crystalline inclusions changed to become electronlight granular inclusions”

✓ located verbatim in the source · abstract, characters 912–1028 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Granular inclusions were associated with virus particles in infected cells.

Outcome
granular inclusionse0
Qualifier
always associated with the virus particlese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“granular inclusions, another type of inclusion body, which were easily found in RWV-infected cells and always associated with the virus particles”

✓ located verbatim in the source · abstract, characters 1009–1154 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Virus particles increased and accumulated as aggregates in granular inclusions.

Organ / stage
granular inclusionse0
Outcome
RWV particlese0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“RWV particles gradually increased in number and accumulated as virus aggregates in the granular inclusions”

✓ located verbatim in the source · abstract, characters 1156–1262 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Small vesicles developed around inclusion bodies and near the cell lumen.

Organ / stage
cytoplasme0
Outcome
small vesiclese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The small vesicles developed around the inclusion bodies, and more often in the cytoplasm along and near the cell lumen”

✓ located verbatim in the source · abstract, characters 1264–1383 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Small vesicles contained fibrous material resembling nucleic acid strands.

Outcome
fibrous materialse0
Qualifier
like nucleic acid strandse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“They contained fibrous materials like nucleic acid strands”

✓ located verbatim in the source · abstract, characters 1385–1443 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Virus particles were released from inclusion bodies into cytoplasm and vacuoles.

Organ / stage
cytoplasm and vacuolese0
Outcome
virus particlese0
Direction
releasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Subsequently the virus particles were released from the inclusion bodies into the cytoplasm and vacuoles”

✓ located verbatim in the source · abstract, characters 1445–1549 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors interpreted the inclusion bodies as viroplasms.

Outcome
inclusion bodiese0
Qualifier
thought to be viroplasmse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“From these observations the inclusion bodies were thought to be viroplasms”

✓ located verbatim in the source · abstract, characters 1551–1625 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Virus particles in vacuoles often formed crystalline arrays.

Organ / stage
vacuolese0
Outcome
crystalline arrayse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The virus particles in vacuoles often showed crystalline arrays”

✓ located verbatim in the source · abstract, characters 1627–1690 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Phloem necrosis was common in infected rice.

Outcome
Phloem necrosise0
Direction
very commone0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Phloem necrosis was very common”

✓ located verbatim in the source · abstract, characters 1692–1723 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Starch grains often accumulated in mesophyll chloroplasts due to phloem necrosis.

Organ / stage
chloroplasts in mesophyll cellse0
Outcome
accumulation of starch grainse0
Qualifier
due to the phloem necrosise0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“accumulation of starch grains due to the phloem necrosis was often observed in chloroplasts in mesophyll cells”

✓ located verbatim in the source · abstract, characters 1729–1839 · show in text ↑
t0

“Some Properties and Intracellular Appearance of Rice Waika Virus”

✓ located verbatim in the source · title, characters 0–64 · show in text ↑