Paper · 2000 · Molecular Plant-Microbe Interactions

The sss Colonization Gene of the Tomato-Fusarium oxysporum f. sp. radicis-lycopersici Biocontrol Strain Pseudomonas fluorescens WCS365 Can Improve Root Colonization of Other Wild-type Pseudomonas spp. Bacteria

Linda C. Dekkers; Ine H. M. Mulders; Claartje C. Phoelich; et al.

10
claims
19
verbatim quotes
155
citations
2
research areas
✓
Open access · other-oa

Abstract

We show that the disease tomato foot and root rot caused by the pathogenic fungus Fusarium oxysporum f. sp. radicis-lycopersici can be controlled by inoculation of seeds with cells of the efficient root colonizer Pseudomonas fluorescens WCS365, indicating that strain WCS365 is a biocontrol strain. The mechanism for disease suppression most likely is induced systemic resistance. P. fluorescens strain WCS365 and P. chlororaphis strain PCL1391, which acts through the production of the antibiotic phenazine-1-carboxamide, were differentially labeled using genes encoding autofluorescent proteins. Inoculation of seeds with a 1:1 mixture of these strains showed that, at the upper part of the root, the two cell types were present as microcolonies of either one or both cell types. Microcolonies at the lower root part were predominantly of one cell type. Mixed inoculation tended to improve biocontrol in comparison with single inoculations. In contrast to what was observed previously for strain PCL1391, mutations in various colonization genes, including sss, did not consistently decrease the biocontrol ability of strain WCS365. Multiple copies of the sss colonization gene in WCS365 improved neither colonization nor biocontrol by this strain. However, introduction of the sss-containing DNA fragment into the poor colonizer P. fluorescens WCS307 and into the good colonizer P. fluorescens F113 increased the competitive tomato root tip colonization ability of the latter strains 16- to 40-fold and 8- to 16-fold, respectively. These results show that improvement of the colonization ability of wild-type Pseudomonas strains by genetic engineering is a realistic goal.

Abstract from the paper’s OpenAlex record; open copy licensed other-oa. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 10

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Seed inoculation with Pseudomonas fluorescens WCS365 controlled tomato foot and root rot caused by Fusarium oxysporum f. sp. radicis-lycopersici.

Treatment
inoculation of seeds with cells of the efficient root colonizer Pseudomonas fluorescens WCS365e0
Interactor
Fusarium oxysporum f. sp. radicis-lycopersiciFusarium oxysporum f. sp. radicis-lycopersicie0pathogen
Second interactor
Pseudomonas fluorescens WCS365Pseudomonas fluorescense0biocontrol_agent
Outcome
tomato foot and root rote0
Direction
controllede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Fusarium oxysporum f. sp. radicis-lycopersici
Fusarium oxysporum f. sp. radicis-lycopersici · Interactor · picture of its genus (no picture of exactly this name)Public domain · Wikimedia Commons ↗
Pseudomonas fluorescens
Pseudomonas fluorescens · Second interactorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the disease tomato foot and root rot caused by the pathogenic fungus Fusarium oxysporum f. sp. radicis-lycopersici can be controlled by inoculation of seeds with cells of the efficient root colonizer Pseudomonas fluorescens WCS365”

✓ located verbatim in the source · abstract, characters 13–243 · show in text ↑
Mechanismhypothesisoriginal resultpositivebasis n/a

Claim · model-written summary

Induced systemic resistance was proposed as the likely mechanism of disease suppression.

Interactor
Fusarium oxysporum f. sp. radicis-lycopersiciFusarium oxysporum f. sp. radicis-lycopersicie1pathogen
Outcome
disease suppressione0
Qualifier
induced systemic resistancee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Fusarium oxysporum f. sp. radicis-lycopersici
Fusarium oxysporum f. sp. radicis-lycopersici · Interactor · picture of its genus (no picture of exactly this name)Public domain · Wikimedia Commons ↗

Verbatim

e0

“The mechanism for disease suppression most likely is induced systemic resistance.”

✓ located verbatim in the source · abstract, characters 299–380 · show in text ↑
e1

“tomato foot and root rot caused by the pathogenic fungus Fusarium oxysporum f. sp. radicis-lycopersici”

✓ located verbatim in the source · abstract, characters 25–127 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

At the upper root, mixed inoculation produced microcolonies containing one or both Pseudomonas cell types.

Organ / stage
upper part of the roote0
Interactor
P. fluorescens strain WCS365Pseudomonas fluorescense1biocontrol_agent
Second interactor
P. chlororaphis strain PCL1391Pseudomonas chlororaphise1biocontrol_agent
Outcome
microcolonies of either one or both cell typese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Pseudomonas fluorescens
Pseudomonas fluorescens · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“at the upper part of the root, the two cell types were present as microcolonies of either one or both cell types”

✓ located verbatim in the source · abstract, characters 668–780 · show in text ↑
e1

“P. fluorescens strain WCS365 and P. chlororaphis strain PCL1391”

✓ located verbatim in the source · abstract, characters 381–444 · show in text ↑
t0

“Tomato-Fusarium oxysporum”

✓ located verbatim in the source · title, characters 33–58 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

At the lower root, microcolonies predominantly contained one Pseudomonas cell type.

Interactor
P. fluorescens strain WCS365Pseudomonas fluorescense1biocontrol_agent
Second interactor
P. chlororaphis strain PCL1391Pseudomonas chlororaphise1biocontrol_agent
Outcome
Microcolonies at the lower root part were predominantly of one cell typee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Pseudomonas fluorescens
Pseudomonas fluorescens · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Microcolonies at the lower root part were predominantly of one cell type.”

✓ located verbatim in the source · abstract, characters 782–855 · show in text ↑
e1

“P. fluorescens strain WCS365 and P. chlororaphis strain PCL1391”

✓ located verbatim in the source · abstract, characters 381–444 · show in text ↑
t0

“Tomato-Fusarium oxysporum”

✓ located verbatim in the source · title, characters 33–58 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Mixed inoculation tended to improve biocontrol relative to single inoculations.

Treatment
Mixed inoculatione0
Interactor
Fusarium oxysporumFusarium oxysporumt0pathogen
Outcome
biocontrole0
Direction
improvee0
Qualifier
tended toe0
Comparator
single inoculationse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Fusarium oxysporum
Fusarium oxysporum · InteractorClemson University - USDA Cooperative Extension Slide Series · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Mixed inoculation tended to improve biocontrol in comparison with single inoculations.”

✓ located verbatim in the source · abstract, characters 856–942 · show in text ↑
t0

“Tomato-Fusarium oxysporum”

✓ located verbatim in the source · title, characters 33–58 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Mutations in WCS365 colonization genes including sss did not consistently reduce biocontrol.

Treatment
mutations in various colonization genes, including ssse0
Interactor
Fusarium oxysporumFusarium oxysporumt0pathogen
Gene
ssse0
Outcome
biocontrol ability of strain WCS365e0
Direction
did not consistently decreasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Fusarium oxysporum
Fusarium oxysporum · InteractorClemson University - USDA Cooperative Extension Slide Series · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“mutations in various colonization genes, including sss, did not consistently decrease the biocontrol ability of strain WCS365”

✓ located verbatim in the source · abstract, characters 1007–1132 · show in text ↑
t0

“Tomato-Fusarium oxysporum”

✓ located verbatim in the source · title, characters 33–58 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Multiple sss copies in WCS365 did not improve its colonization.

Treatment
Multiple copies of the sss colonization gene in WCS365e0
Interactor
WCS365e0biocontrol_agent
Gene
ssse0
Outcome
colonizatione0
Direction
improved neithere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Multiple copies of the sss colonization gene in WCS365 improved neither colonization nor biocontrol by this strain.”

✓ located verbatim in the source · abstract, characters 1134–1249 · show in text ↑
t0

“Tomato-Fusarium oxysporum”

✓ located verbatim in the source · title, characters 33–58 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Multiple sss copies in WCS365 did not improve its biocontrol.

Treatment
Multiple copies of the sss colonization gene in WCS365e0
Interactor
Fusarium oxysporumFusarium oxysporumt0pathogen
Gene
ssse0
Outcome
biocontrole0
Direction
improved neithere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Fusarium oxysporum
Fusarium oxysporum · InteractorClemson University - USDA Cooperative Extension Slide Series · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Multiple copies of the sss colonization gene in WCS365 improved neither colonization nor biocontrol by this strain.”

✓ located verbatim in the source · abstract, characters 1134–1249 · show in text ↑
t0

“Tomato-Fusarium oxysporum”

✓ located verbatim in the source · title, characters 33–58 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Introducing an sss DNA fragment increased competitive tomato root tip colonization by P. fluorescens WCS307 16- to 40-fold.

Treatment
introduction of the sss-containing DNA fragment into the poor colonizer P. fluorescens WCS307e0
Interactor
P. fluorescens WCS307Pseudomonas fluorescense0biocontrol_agent
Gene
ssse0
Outcome
competitive tomato root tip colonization abilitye0
Direction
increasede0
Value
16- to 40-folde0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Pseudomonas fluorescens
Pseudomonas fluorescens · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“introduction of the sss-containing DNA fragment into the poor colonizer P. fluorescens WCS307 and into the good colonizer P. fluorescens F113 increased the competitive tomato root tip colonization ability of the latter strains 16- to 40-fold and 8- to 16-fold, respectively”

✓ located verbatim in the source · abstract, characters 1259–1532 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Introducing an sss DNA fragment increased competitive tomato root tip colonization by P. fluorescens F113 8- to 16-fold.

Treatment
introduction of the sss-containing DNA fragment into the poor colonizer P. fluorescens WCS307 and into the good colonizer P. fluorescens F113e0
Interactor
P. fluorescens F113Pseudomonas fluorescense0biocontrol_agent
Gene
ssse0
Outcome
competitive tomato root tip colonization abilitye0
Direction
increasede0
Value
8- to 16-folde0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Pseudomonas fluorescens
Pseudomonas fluorescens · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“introduction of the sss-containing DNA fragment into the poor colonizer P. fluorescens WCS307 and into the good colonizer P. fluorescens F113 increased the competitive tomato root tip colonization ability of the latter strains 16- to 40-fold and 8- to 16-fold, respectively”

✓ located verbatim in the source · abstract, characters 1259–1532 · show in text ↑

Pseudomonas fluorescens · disease · Solanum lycopersicum (tomato)Positive and negative results

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18 papers in the same direction as this paper · 1 in the opposite direction

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2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

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3 papers: 2 positive, 1 negative or no effect

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loss of function · Fusarium oxysporum · Solanum lycopersicum (tomato)Positive and negative results

5 papers: 2 positive, 3 negative or no effect

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inoculation · Fusarium oxysporum · Solanum lycopersicum (tomato)Positive and negative results

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infection · disease · Solanum lycopersicum (tomato)Positive and negative results

56 papers: 29 positive, 27 negative or no effect

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infection · Fusarium oxysporum · Solanum lycopersicum (tomato)Results agree

6 papers: 0 positive, 6 negative or no effect

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.