Paper · 2008 · DNA sequence

Molecular cloning and characterization of a novel H+-translocating pyrophosphatase gene inZea mays

Guidong Yue; Guidong Yue; Zhenhua Sui; et al.

10
claims
17
verbatim quotes
7
citations
3
research areas
—
Not open access

Abstract

A cDNA encoding a putative H+-translocating pyrophosphatase (H+-PPase) has been cloned from Zea mays by suppression subtractive hybridization (SSH) coupled with in silico cloning approach. The isolated 2974 bp full-length cDNA named ZmGPP contains a single 2400 bp open reading frame encoding a putative protein of 799 amino acids. The predicted protein has 16 transmembrane domains and is significantly similar to Golgi apparatus resident type-II H+-PPase from Arabidopsis thaliana. DNA gel blotting analysis shows that ZmGPP is a low-copy gene. Organ expression pattern analysis reveals that ZmGPPexpressed highly in leaf and tassel, followed by in stem, root, and ear. The Real-time RT-PCR assays showed that the expression of ZmGPP was up-regulated both in shoots and roots of maize seedlings under dehydration, cold and high salt stresses. Those results suggest that the ZmGPP product may play an important role in abiotic stress tolerance of Z. mays.

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Claims 10

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

ZmGPP cDNA was cloned from maize.

Taxon
Zea maysZea mayse0
Gene
ZmGPPe1
Outcome
cDNAe0
Value
2974 bpe1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“A cDNA encoding a putative H+-translocating pyrophosphatase (H+-PPase) has been cloned from Zea mays by suppression subtractive hybridization (SSH) coupled with in silico cloning approach.”

✓ located verbatim in the source · abstract, characters 0–188 · show in text ↑
e1

“The isolated 2974 bp full-length cDNA named ZmGPP”

✓ located verbatim in the source · abstract, characters 189–238 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ZmGPP has 2400 bp open reading frame.

Taxon
Zea maysZea mayst0
Gene
ZmGPPe0
Outcome
open reading framee0
Value
2400 bpe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The isolated 2974 bp full-length cDNA named ZmGPP contains a single 2400 bp open reading frame encoding a putative protein of 799 amino acids.”

✓ located verbatim in the source · abstract, characters 189–331 · show in text ↑
t0

“Zea mays”

✓ located verbatim in the source · title, characters 90–98 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ZmGPP has 799 amino acids putative protein.

Taxon
Zea maysZea mayst0
Gene
ZmGPPe0
Outcome
putative proteine0
Value
799 amino acidse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The isolated 2974 bp full-length cDNA named ZmGPP contains a single 2400 bp open reading frame encoding a putative protein of 799 amino acids.”

✓ located verbatim in the source · abstract, characters 189–331 · show in text ↑
t0

“Zea mays”

✓ located verbatim in the source · title, characters 90–98 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ZmGPP has 16 transmembrane domains.

Taxon
Zea maysZea mayst0
Outcome
transmembrane domainse0
Value
16e0

Not reportedGene

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The predicted protein has 16 transmembrane domains and is significantly similar to Golgi apparatus resident type-II H+-PPase from Arabidopsis thaliana.”

✓ located verbatim in the source · abstract, characters 332–483 · show in text ↑
t0

“Zea mays”

✓ located verbatim in the source · title, characters 90–98 · show in text ↑
Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

The predicted protein is significantly similar to Arabidopsis type-II H+-PPase.

Taxon
Zea maysZea mayst0
Gene
type-II H+-PPasee0
Outcome
significantly similare0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The predicted protein has 16 transmembrane domains and is significantly similar to Golgi apparatus resident type-II H+-PPase from Arabidopsis thaliana.”

✓ located verbatim in the source · abstract, characters 332–483 · show in text ↑
t0

“Zea mays”

✓ located verbatim in the source · title, characters 90–98 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ZmGPP is a low-copy gene.

Taxon
Zea maysZea mayst0
Gene
ZmGPPe0
Outcome
low-copy genee0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“DNA gel blotting analysis shows that ZmGPP is a low-copy gene.”

✓ located verbatim in the source · abstract, characters 484–546 · show in text ↑
t0

“Zea mays”

✓ located verbatim in the source · title, characters 90–98 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ZmGPP expression was highest in leaf and tassel, followed by stem, root, and ear.

Taxon
Zea maysZea mayst0
Organ / stage
leaf and tassele0
Outcome
ZmGPPexpressede0
Direction
highlye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Organ expression pattern analysis reveals that ZmGPPexpressed highly in leaf and tassel, followed by in stem, root, and ear.”

✓ located verbatim in the source · abstract, characters 547–671 · show in text ↑
t0

“Zea mays”

✓ located verbatim in the source · title, characters 90–98 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

ZmGPP expression was up-regulated in shoots and roots under dehydration.

Taxon
maizeZea mayse0
Organ / stage
shoots and rootse0
Treatment
dehydratione0
Gene
ZmGPPe0
Outcome
expression of ZmGPPe0
Direction
up-regulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The Real-time RT-PCR assays showed that the expression of ZmGPP was up-regulated both in shoots and roots of maize seedlings under dehydration, cold and high salt stresses.”

✓ located verbatim in the source · abstract, characters 672–844 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

ZmGPP expression was up-regulated in shoots and roots under cold.

Taxon
maizeZea mayse0
Organ / stage
shoots and rootse0
Treatment
colde0
Gene
ZmGPPe0
Outcome
expression of ZmGPPe0
Direction
up-regulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The Real-time RT-PCR assays showed that the expression of ZmGPP was up-regulated both in shoots and roots of maize seedlings under dehydration, cold and high salt stresses.”

✓ located verbatim in the source · abstract, characters 672–844 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

ZmGPP expression was up-regulated in shoots and roots under high salt stresses.

Taxon
maizeZea mayse0
Organ / stage
shoots and rootse0
Treatment
high salt stressese0
Gene
ZmGPPe0
Outcome
expression of ZmGPPe0
Direction
up-regulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The Real-time RT-PCR assays showed that the expression of ZmGPP was up-regulated both in shoots and roots of maize seedlings under dehydration, cold and high salt stresses.”

✓ located verbatim in the source · abstract, characters 672–844 · show in text ↑

salinity · molecular: expression · Zea mays (maize)Positive and negative results

32 papers: 22 positive, 10 negative or no effect

21 papers in the same direction as this paper · 10 in the opposite direction

  1. negative
  2. negative
  3. negative

28 papers more in this group

See all 32 papers →

cold · molecular: expression · Zea mays (maize)Positive and negative results

32 papers: 21 positive, 11 negative or no effect

20 papers in the same direction as this paper · 10 in the opposite direction · 1 reporting no difference from an alternative

  1. negative
  2. no effect
  3. no effect

28 papers more in this group

See all 32 papers →

drought · molecular: expression · Zea mays (maize)Positive and negative results

65 papers: 43 positive, 22 negative or no effect

42 papers in the same direction as this paper · 22 in the opposite direction

  1. no effect
  2. negative
  3. no effect

61 papers more in this group

See all 65 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.