Paper · 2004 · Physiologia Plantarum

Xyloglucan endotransglucosylase/hydrolase genes in cucumber (Cucumis sativus) – differential expression during somatic embryogenesis†

Robert Malinowski; Marcin Filipecki; Norikazu Tagashira; et al.

5
claims
13
verbatim quotes
36
citations
2
research areas
—
Not open access

Abstract

Defined changes in the cell wall directed by many proteins accompany every morphogenetic process in plants. Xyloglucan endotransglucosylase/hydrolase proteins (XTH; EC 2.4.1.207) have the potential to modify the hemicellulose matrix within the cell wall. Cs-XTH1 and Cs-XTH3 genes, which encode XTH proteins, were found among numerous genes that are differentially expressed after the induction of cucumber somatic embryogenesis. The expression of these genes increased during somatic embryogenesis. The Cs-XTH1 gene was localized on the second chromosome near the centromere region, whereas Cs-XTH3 was found in the middle of the fifth chromosome's longer arm. Northern blot hybridization showed that both genes were preferentially expressed in roots. We also observed higher accumulation of both transcripts in somatic embryos than in the proembryogenic mass. The localization of mRNA by in situ hybridization revealed that the Cs-XTH1 transcripts were largely accumulated in the presumptive cotyledon primordia of somatic embryos. The XTH gene family consists of a number of genes with a high degree of structural similarity. Screening a cucumber genomic library has identified other members of this gene family. The intron/exon structure, sequence similarities and the close chromosomal distance between some members suggest their common evolutionary origin. The involvement of XTH-related genes in somatic embryo formation is discussed.

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Claims 5

Associationobservedoriginal resultmeasured

Claim · model-written summary

Cs-XTH1 and Cs-XTH3 expression increased during somatic embryogenesis in cucumber.

Taxon
cucumberCucumis sativust0
Gene
Cs-XTH1 and Cs-XTH3e0
Outcome
expressione1
Direction
increasede1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“cucumber (Cucumis sativus)”

✓ located verbatim in the source · title, characters 51–77 · show in text ↑
e0

“Cs-XTH1 and Cs-XTH3 genes, which encode XTH proteins, were found among numerous genes that are differentially expressed after the induction of cucumber somatic embryogenesis”

✓ located verbatim in the source · abstract, characters 255–428 · show in text ↑
e1

“The expression of these genes increased during somatic embryogenesis”

✓ located verbatim in the source · abstract, characters 430–498 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Cs-XTH1 and Cs-XTH3 were preferentially expressed in roots of cucumber.

Taxon
cucumberCucumis sativust0
Organ / stage
rootse2
Gene
Cs-XTH1 and Cs-XTH3e0
Outcome
preferentially expressede2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“cucumber (Cucumis sativus)”

✓ located verbatim in the source · title, characters 51–77 · show in text ↑
e0

“Cs-XTH1 and Cs-XTH3 genes, which encode XTH proteins, were found among numerous genes that are differentially expressed after the induction of cucumber somatic embryogenesis”

✓ located verbatim in the source · abstract, characters 255–428 · show in text ↑
e2

“Northern blot hybridization showed that both genes were preferentially expressed in roots”

✓ located verbatim in the source · abstract, characters 662–751 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Both XTH transcripts accumulated at higher levels in somatic embryos than in the proembryogenic mass.

Taxon
cucumberCucumis sativust0
Organ / stage
somatic embryose3
Gene
Cs-XTH1 and Cs-XTH3e0
Outcome
accumulation of both transcriptse3
Direction
highere3
Comparator
proembryogenic masse3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“cucumber (Cucumis sativus)”

✓ located verbatim in the source · title, characters 51–77 · show in text ↑
e0

“Cs-XTH1 and Cs-XTH3 genes, which encode XTH proteins, were found among numerous genes that are differentially expressed after the induction of cucumber somatic embryogenesis”

✓ located verbatim in the source · abstract, characters 255–428 · show in text ↑
e3

“We also observed higher accumulation of both transcripts in somatic embryos than in the proembryogenic mass”

✓ located verbatim in the source · abstract, characters 753–860 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Cs-XTH1 transcripts were largely accumulated in the presumptive cotyledon primordia of somatic embryos.

Taxon
cucumberCucumis sativust0
Organ / stage
presumptive cotyledon primordia of somatic embryose4
Gene
Cs-XTH1e4
Outcome
Cs-XTH1 transcripts were largely accumulatede4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“cucumber (Cucumis sativus)”

✓ located verbatim in the source · title, characters 51–77 · show in text ↑
e4

“the Cs-XTH1 transcripts were largely accumulated in the presumptive cotyledon primordia of somatic embryos”

✓ located verbatim in the source · abstract, characters 926–1032 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The XTH gene family of cucumber consists of genes with a high degree of structural similarity.

Taxon
cucumberCucumis sativust0
Gene
XTHe5
Outcome
structural similaritye5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“cucumber (Cucumis sativus)”

✓ located verbatim in the source · title, characters 51–77 · show in text ↑
e5

“The XTH gene family consists of a number of genes with a high degree of structural similarity”

✓ located verbatim in the source · abstract, characters 1034–1127 · show in text ↑