Paper · 2000 · Genetics

Paramutation Alters Regulatory Control of the Maize pl Locus

Jay B Hollick; Garth I Patterson; Ingrid M Asmundsson; et al.

7
claims
14
verbatim quotes
58
citations
1
research areas
✓
Open access

Abstract

The maize purple plant (pl) locus encodes a transcription factor required for anthocyanin pigment synthesis in vegetative and floral tissues. The strongly expressed Pl-Rhoades (Pl-Rh) allele is unstable, spontaneously changing to weaker expression states (Pl') at low frequencies and exclusively changing to Pl' in Pl'/Pl-Rh heterozygotes. The weakly expressed Pl' state is mitotically and meiotically stable, yet reversible. This type of allele-dependent, heritable alteration of gene control is called paramutation. Expression studies herein demonstrate that visible differences in anthocyanin pigment levels mirror pl RNA abundance and that pl paramutation is associated with reduced transcription of the pl gene. This transcriptional alteration is accompanied by acquisition of light-dependent regulation. Restriction endonuclease mapping indicates that these changes in pl gene regulation are not associated with detectable DNA alterations or with extensive changes in cytosine methylation patterns. Genetic tests show that Pl-Blotched (Pl-Bh), a structurally similar pl allele encoding an identical pl RNA and PL protein, does not participate in pl paramutation. This result suggests that if cis-acting sequences are required for pl paramutation they are distinct from the protein coding and immediately adjacent regions. A model is discussed in which pl paramutation results in heritable changes of chromatin structure that fundamentally alter regulatory interactions occurring during plant development.

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Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

The strongly expressed Pl-Rhoades allele of maize pl spontaneously changes to weaker expression states at low frequencies.

Taxon
maizeZea mayst1
Material
Pl-Rhoadese1
Outcome
changing to weaker expression statese1
Qualifier
at low frequenciese1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t1

“Maize pl Locus”

✓ located verbatim in the source · title, characters 46–60 · show in text ↑
e1

“The strongly expressed Pl-Rhoades (Pl-Rh) allele is unstable, spontaneously changing to weaker expression states (Pl') at low frequencies and exclusively changing to Pl' in Pl'/Pl-Rh heterozygotes”

✓ located verbatim in the source · abstract, characters 142–338 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Visible anthocyanin pigment differences in maize mirror pl RNA abundance.

Taxon
maizeZea mayst1
Gene
ple2
Outcome
pl RNA abundancee2

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t1

“Maize pl Locus”

✓ located verbatim in the source · title, characters 46–60 · show in text ↑
e2

“visible differences in anthocyanin pigment levels mirror pl RNA abundance”

✓ located verbatim in the source · abstract, characters 561–634 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Paramutation of maize pl is associated with reduced transcription of the pl gene.

Taxon
maizeZea mayst1
Treatment
pl paramutatione3
Gene
ple3
Outcome
transcription of the pl genee3
Direction
reducede3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t1

“Maize pl Locus”

✓ located verbatim in the source · title, characters 46–60 · show in text ↑
e3

“pl paramutation is associated with reduced transcription of the pl gene”

✓ located verbatim in the source · abstract, characters 644–715 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The transcriptional alteration of maize pl is accompanied by acquisition of light-dependent regulation.

Taxon
maizeZea mayst1
Outcome
acquisition of light-dependent regulatione4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t1

“Maize pl Locus”

✓ located verbatim in the source · title, characters 46–60 · show in text ↑
e4

“This transcriptional alteration is accompanied by acquisition of light-dependent regulation”

✓ located verbatim in the source · abstract, characters 717–808 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Changes in maize pl gene regulation during paramutation are not associated with detectable DNA alterations.

Taxon
maizeZea mayst1
Outcome
detectable DNA alterationse5
Qualifier
or with extensive changes in cytosine methylation patternse5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t1

“Maize pl Locus”

✓ located verbatim in the source · title, characters 46–60 · show in text ↑
e5

“these changes in pl gene regulation are not associated with detectable DNA alterations or with extensive changes in cytosine methylation patterns”

✓ located verbatim in the source · abstract, characters 858–1003 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

The Pl-Blotched allele does not participate in maize pl paramutation.

Taxon
maizeZea mayst1
Material
Pl-Blotched (Pl-Bh)e6
Outcome
participate in pl paramutatione6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t1

“Maize pl Locus”

✓ located verbatim in the source · title, characters 46–60 · show in text ↑
e6

“Pl-Blotched (Pl-Bh), a structurally similar pl allele encoding an identical pl RNA and PL protein, does not participate in pl paramutation”

✓ located verbatim in the source · abstract, characters 1029–1167 · show in text ↑
Mechanismhypothesisoriginal resultbasis n/a

Claim · model-written summary

Paramutation may cause heritable changes of chromatin structure that alter regulatory interactions during maize development.

Taxon
maizeZea mayst1
Treatment
pl paramutatione7
Outcome
alter regulatory interactions occurring during plant developmente7
Qualifier
heritable changes of chromatin structuree7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

t1

“Maize pl Locus”

✓ located verbatim in the source · title, characters 46–60 · show in text ↑
e7

“A model is discussed in which pl paramutation results in heritable changes of chromatin structure that fundamentally alter regulatory interactions occurring during plant development”

✓ located verbatim in the source · abstract, characters 1328–1509 · show in text ↑