By research area › Molecular genetics & genomics › Mechanism

Mechanismobservedoriginal resultmeasured

Claim · model-written summary

Brassinazole application and VIGS experiments verified that the ICE-CBF cold response pathway can regulate CsCOR413.

Taxon: tea plantt0
Treatment: Exogenous application of brassinazole (BRZ)e0
Gene: CsCOR413e0
Outcome: regulate the low-temperature-regulated protein CsCOR413e0
Qualifier: ICE-CBF cold response pathwaye0

Verbatim

t0
“cold resistance in tea plant”
✓ located verbatim in the source · title, characters 76–104

e0
“Exogenous application of brassinazole (BRZ) and VIGS silencing experiments verified that the ICE-CBF cold response pathway could regulate the low-temperature-regulated protein CsCOR413”
✓ located verbatim in the source · abstract, characters 1159–1343

Title

The CsBES1-14-CsCOR413 module mediated by brassinolide positively regulates cold resistance in tea plant

Chao Wang; Jinyu Yang; Yichen Zhao; et al. Horticulture Research 2026. doi:10.1093/hr/uhag098

Other claims from this paper (10)

Observation The CsBES1-14 gene was cloned and identified from the tea plant transcriptome database.
Observation Biochemical analyses identified CsBES1-14 as a nuclear-localized transcriptional activator.
Intervention effect Brassinosteroid induced CsBES1-14 expression.
Intervention effect Low temperature induced CsBES1-14 expression.
Intervention effect Arabidopsis thaliana plants overexpressing CsBES1-14 showed increased chilling tolerance.
Intervention effect Arabidopsis thaliana plants overexpressing CsBES1-14 showed promoted root growth.
Intervention effect Arabidopsis thaliana plants overexpressing CsBES1-14 showed increased expression of cold responsive genes.
Intervention effect Silencing CsBES1-14 by VIGS in tea plant notably impaired cold tolerance.
Observation Yeast one-hybrid screening identified CsCOR413 as a downstream target of CsBES1-14.
Observation Electrophoretic mobility shift assays confirmed direct binding of CsBES1-14 to cis-elements in the CsCOR413 promoter.

Mechanismhypothesisoriginal resultsimulated

Claim · model-written summary

Protein structure prediction suggests the nonsense mutation in KDS-1830C truncates a beta sheet, potentially impairing amylopectin binding and granule crystallization.

Taxon: riceOryza sativat0
Material: KDS-1830Ce0
Outcome: truncated β sheet structuree0
Qualifier: potentially impairing amylopectin binding and granule crystallizatione0

Verbatim

t0
“rice”
✓ located verbatim in the source · title, characters 79–83

e0
“Protein structure prediction suggests that the nonsense mutation in "KDS-1830C" results in a truncated β sheet structure, potentially impairing amylopectin binding and granule crystallization”
✓ located verbatim in the source · abstract, characters 1188–1379

Title

Identification of a novel mutant allele of the LIKE EARLY STARVATION 1 gene in rice ( Oryza sativa L.) using QTL-seq

Kyu-Chan Shim; HyunJung Kim; Mi-Ra Yoon; et al. G3 Genes Genomes Genetics 2026. doi:10.1093/g3journal/jkag108

Other claims from this paper (7)

Mechanismhypothesisoriginal resultbasis n/a

Claim · model-written summary

The authors propose that replication templates in the centromere originate from multiple CENH3-nucleosome complexes bound to CentGm sequences.

Taxon: soybeanGlycine maxt0
Gene: CENH3e0
Outcome: replication templatese0

Verbatim

t0
“soybean centromeres”
✓ located verbatim in the source · title, characters 48–67

e0
“We propose a model in which replication templates within the centromere region originate from multiple CENH3-nucleosome complexes bound to CentGm sequences”
✓ located verbatim in the source · abstract, characters 1491–1646

Title

Genetic diversity and architectural dynamics of soybean centromeres

Yicheng Huang; Enlai Guan; Shipeng Song; et al. Genome biology 2026. doi:10.1186/s13059-025-03924-9

Other claims from this paper (6)

Mechanismobservedoriginal resultmeasured

Claim · model-written summary

MdMYB14 bound to the P1 site of the AC element in the MdPAL1 promoter and activated MdPAL1 expression.

Taxon: appleMalus domesticat0
Gene: MdMYB14e0
Outcome: activate its expressione0
Qualifier: bound to the P1 site of the AC element in MdPAL1 promotere0

Verbatim

e0
“The transcription factor MdMYB14 was induced by JA and bound to the P1 site of the AC element in MdPAL1 promoter to activate its expression”
✓ located verbatim in the source · abstract, characters 457–596

t0
“Apple Fruit Russeting”
✓ located verbatim in the source · title, characters 81–102

Title

MYB14– PAL1 Modulates the Role of Jasmonic Acid in the Biosynthesis of Lignin in Apple Fruit Russeting Induced by Mechanical Damage

Ziyan Zhang; Huaina Gao; Chao Xu; et al. Journal of Agricultural and Food Chemistry 2026. doi:10.1021/acs.jafc.5c12408

Other claims from this paper (6)

Observation Lignin content increased significantly during apple fruit russeting with mechanical damage.
Observation Expression of structural genes in lignin biosynthetic pathways increased in russeted apple fruits, especially MdPAL1.
Intervention effect The transcription factor MdMYB14 was induced by jasmonic acid in apple.
Observation The content of various jasmonates increased in russeted apple fruits.
Intervention effect The lignin content of apple increased after jasmonic acid treatment.
Mechanism MdMYB14 positively regulated lignin biosynthesis in apple, partially depending on MdPAL1.

Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

MdMYB14 positively regulated lignin biosynthesis in apple, partially depending on MdPAL1.

Taxon: appleMalus domesticat0
Gene: MdMYB14e0
Outcome: lignin biosynthesise0
Qualifier: partially depended on MdPAL1e0

Verbatim

e0
“MdMYB14 positively regulated lignin biosynthesis, which partially depended on MdPAL1”
✓ located verbatim in the source · abstract, characters 724–808

t0
“Apple Fruit Russeting”
✓ located verbatim in the source · title, characters 81–102

Title

MYB14– PAL1 Modulates the Role of Jasmonic Acid in the Biosynthesis of Lignin in Apple Fruit Russeting Induced by Mechanical Damage

Ziyan Zhang; Huaina Gao; Chao Xu; et al. Journal of Agricultural and Food Chemistry 2026. doi:10.1021/acs.jafc.5c12408

Other claims from this paper (6)

Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The candidate genes are associated with lipid oxidation pathways linked to glycerolipid and glycerophospholipid metabolism, supporting membrane stability and mitigating Pb toxicity.

Taxon: dark jutet0
Gene: These genese0
Outcome: Pb toxicitye0
Qualifier: lipid oxidation pathways linked to glycerolipid and glycerophospholipid metabolisme0

Verbatim

t0
“dark jute”
✓ located verbatim in the source · title, characters 89–98

e0
“These genes are associated with lipid oxidation pathways linked to glycerolipid and glycerophospholipid metabolism, which support membrane stability and mitigate Pb toxicity in sensitive cellular components”
✓ located verbatim in the source · abstract, characters 1310–1516

Title

Mapping and identifying candidate genes enabling lead (Pb) accumulation and tolerance in dark jute (Corchorus olitorius L.) using BSA-seq and RNA-seq

Victoria Oluwapelumi Akintayo; Xu Jian-tang; Li Han; et al. Industrial Crops and Products 2026. doi:10.1016/j.indcrop.2025.122558

Other claims from this paper (9)

Observation BSA-seq identified 668,436 high-quality SNPs in dark jute.
Observation Overlapping SNP and InDel signals revealed six candidate regions on chromosome 5 spanning 0.46 Mb.
Observation Transcriptome data were used to screen 142 genes within the region, from which six candidate genes were selected.
Observation COS05g_00848 and COS05g_00849 encode lipoxygenases.
Observation COS05g_00890 encodes a mitochondrial ADP/ATP carrier protein.
Observation COS05g_00801 encodes PTZ00169 protein.
Observation COS05g_01275 and COS05g_01276 lack predicted protein families, suggesting novel functions.
Intervention effect qRT-PCR showed COS05g_00801 (PTZ00169) is significantly upregulated under Pb stress.
Intervention effect qRT-PCR showed COS05g_00848 (LOX) is significantly upregulated under Pb stress.

Mechanismhypothesisoriginal resultpositivemeasured

Claim · model-written summary

ZmMAGL could act as a positive regulator enhancing chilling tolerance in maize.

Taxon: maizeZea mayse1
Gene: ZmMAGLe0
Outcome: chilling tolerancee0
Qualifier: positive regulatore0

Verbatim

e0
“Here, we demonstrate that the ZmMAGL could be a positive regulator in plants to enhance chilling tolerance”
✓ located verbatim in the source · abstract, characters 286–392

e1
“in maize under chilling stress”
✓ located verbatim in the source · abstract, characters 1103–1133

Title

Monoacylglycerol lipase ZmMAGL is required to maintain photosynthesis and growth at low temperature

Ming Yang; Yuan Jiang; Yuanjia Fu; et al. The Crop Journal 2026. doi:10.1016/j.cj.2025.12.009

Other claims from this paper (5)

Mechanismobservedoriginal resultmeasured

Claim · model-written summary

ZmMAGL directly interacts with ZmEULS3, and together they regulate chilling tolerance in maize.

Taxon: maizeZea mayse1
Gene: ZmMAGLe0
Outcome: chilling tolerancee0
Qualifier: directly interacts with ZmEULS3e0

Verbatim

e0
“We show that the ZmMAGL directly interacts with ZmEULS3 for regulating chilling tolerance together”
✓ located verbatim in the source · abstract, characters 555–653

e1
“in maize under chilling stress”
✓ located verbatim in the source · abstract, characters 1103–1133

Title

Monoacylglycerol lipase ZmMAGL is required to maintain photosynthesis and growth at low temperature

Ming Yang; Yuan Jiang; Yuanjia Fu; et al. The Crop Journal 2026. doi:10.1016/j.cj.2025.12.009

Other claims from this paper (5)

Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

ZmFBIP could enhance ZmMAGL activity by binding to its promoter region in maize.

Taxon: maizeZea mayse1
Gene: ZmFBIPe0
Outcome: ZmMAGL activitye0
Qualifier: binding to its promoter regione0

Verbatim

e0
“the ZmFBIP could enhance the ZmMAGL activity by binding to its promoter region”
✓ located verbatim in the source · abstract, characters 668–746

e1
“in maize under chilling stress”
✓ located verbatim in the source · abstract, characters 1103–1133

Title

Monoacylglycerol lipase ZmMAGL is required to maintain photosynthesis and growth at low temperature

Ming Yang; Yuan Jiang; Yuanjia Fu; et al. The Crop Journal 2026. doi:10.1016/j.cj.2025.12.009

Other claims from this paper (5)

Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

Multi-omics analysis indicated that ZmMAGL could be involved in fatty acid remodeling under chilling stress, maintaining photosynthesis capacity and regular growth in maize.

Taxon: maizeZea mayse1
Treatment: chilling stresse0
Gene: ZmMAGLe0
Outcome: photosynthesis capacity and regular growthe0
Qualifier: fatty acid remodelinge0

Verbatim

e0
“Further multi-omics analysis revealed that the ZmMAGL could be involved in fatty acid remodeling under chilling stress to maintain photosynthesis capacity and regular growth”
✓ located verbatim in the source · abstract, characters 748–921

e1
“in maize under chilling stress”
✓ located verbatim in the source · abstract, characters 1103–1133

Title

Monoacylglycerol lipase ZmMAGL is required to maintain photosynthesis and growth at low temperature

Ming Yang; Yuan Jiang; Yuanjia Fu; et al. The Crop Journal 2026. doi:10.1016/j.cj.2025.12.009

Other claims from this paper (5)

Mechanism 170,766 claims

170,766 claims