Paper · 1994 · PLANT PHYSIOLOGY

Dark and Circadian Regulation of mRNA Accumulation in the Short-Day Plant Pharbitis nil

S. D. O'Neill; X. S. Zhang; C. C. Zheng

11
claims
23
verbatim quotes
31
citations
2
research areas
✓
Open access

Abstract

The developmental transition of the meristem from vegetative to reproductive growth is controlled by the cyclic alternation of light and darkness in photoperiodic plants. Photoperiod is perceived in the leaves or cotyledons, where a flower-inducing signal is produced and transmitted to the apex. To begin to understand the molecular basis of the photoperiodic induction of flowering, we investigated changes in gene expression at the level of mRNA abundance that occur in association with dark induction of flowering in the short-day species Pharbitis nil. Several cDNAs were isolated that corresponded to mRNAs whose abundance is altered after the transition to darkness. The pattern of increase in mRNA levels corresponding to one cDNA clone, PN1, showed a dark-induced maximum at 8 h of darkness, whereas a second clone, PN9, showed a dark-induced accumulation of mRNA with peak levels at 12 to 16 h of darkness. When plants were held in continuous darkness, both PN1 and PN9 exhibited rhythmic patterns of mRNA accumulation with an approximate circadian periodicity, suggesting that their expression is under the control of an endogenous clock. The observed pattern of expression of PN1 and PN9 in cotyledon tissue was unusual in that darkness rather than light promoted mRNA accumulation, which is a temporal pattern of expression distinct from that of several other Pharbitis genes, including Cab, PsaG, and actin, whose mRNAs were most prevalent or equally prevalent in the light. Brief illumination of an inductive dark period by a red light night break strongly inhibited the accumulation of both PN1 and PN9 mRNA. The expression of both PN1 and PN9 was spatially regulated in that mRNA transcripts were detected in the cotyledons and stems, but not the roots, of photoperiodically competent seedlings. Both PN1 and PN9 appeared to be present as single-copy genes in the Pharbitis genome. Sequence analysis has not determined the identity of these genes. Overall, the accumulation of mRNAs corresponding to both PN1 and PN9 closely paralleled the process of photoperiodic floral induction in P. nil, but a clear involvement with this process cannot be established from our findings because of the difficulty of separating photoperiodic events from other light-regulated processes, especially those involved in photosynthesis, such as Cab gene expression. These results identify the products of circadian-regulated genes in photoreceptive tissue of P. nil and support the concept that circadian-regulated gene expression interacting with darkness may be involved in the regulation of photoperiodically controlled physiological processes, including flower induction.

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Claims 11

Observationobservedoriginal resultmeasured

Claim · model-written summary

Several cDNAs corresponded to transcripts altered after the transition to darkness.

Taxon
Pharbitis nilIpomoea nilt0
Treatment
transition to darknesse0
Outcome
mRNAs whose abundance is alterede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ipomoea nil
Ipomoea nil · TaxonKENPEI · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Several cDNAs were isolated that corresponded to mRNAs whose abundance is altered after the transition to darkness.”

✓ located verbatim in the source · abstract, characters 558–673 · show in text ↑
t0

“Pharbitis nil”

✓ located verbatim in the source · title, characters 74–87 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

PN1 mRNA rose to a dark-induced maximum after 8 h.

Taxon
Pharbitis nilIpomoea nilt0
Treatment
darknesse0
Gene
PN1e0
Outcome
mRNA levelse0
Direction
increasee0
Value
8 he0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ipomoea nil
Ipomoea nil · TaxonKENPEI · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The pattern of increase in mRNA levels corresponding to one cDNA clone, PN1, showed a dark-induced maximum at 8 h of darkness”

✓ located verbatim in the source · abstract, characters 674–799 · show in text ↑
t0

“Pharbitis nil”

✓ located verbatim in the source · title, characters 74–87 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

PN9 mRNA accumulated in darkness and peaked at 12 to 16 h.

Taxon
Pharbitis nilIpomoea nilt0
Treatment
darknesse0
Gene
PN9e0
Outcome
accumulation of mRNAe0
Direction
peake0
Value
12 to 16 he0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ipomoea nil
Ipomoea nil · TaxonKENPEI · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“a second clone, PN9, showed a dark-induced accumulation of mRNA with peak levels at 12 to 16 h of darkness”

✓ located verbatim in the source · abstract, characters 809–915 · show in text ↑
t0

“Pharbitis nil”

✓ located verbatim in the source · title, characters 74–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

PN1 and PN9 transcripts accumulated rhythmically with approximate circadian periodicity in continuous darkness.

Taxon
Pharbitis nilIpomoea nilt0
Treatment
continuous darknesse0
Gene
PN1 and PN9e0
Outcome
rhythmic patterns of mRNA accumulatione0
Qualifier
approximate circadian periodicitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ipomoea nil
Ipomoea nil · TaxonKENPEI · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“When plants were held in continuous darkness, both PN1 and PN9 exhibited rhythmic patterns of mRNA accumulation with an approximate circadian periodicity”

✓ located verbatim in the source · abstract, characters 917–1070 · show in text ↑
t0

“Pharbitis nil”

✓ located verbatim in the source · title, characters 74–87 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Darkness promoted PN1 and PN9 transcript accumulation in cotyledons, unlike the light prevalence of Cab, PsaG and actin transcripts.

Taxon
Pharbitis nilIpomoea nilt0
Gene
Cab, PsaG, and actine0
Outcome
mRNA accumulatione0
Direction
promotede0
Comparator
lighte0

Not reportedOrgan / stage

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ipomoea nil
Ipomoea nil · TaxonKENPEI · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“darkness rather than light promoted mRNA accumulation, which is a temporal pattern of expression distinct from that of several other Pharbitis genes, including Cab, PsaG, and actin, whose mRNAs were most prevalent or equally prevalent in the light”

✓ located verbatim in the source · abstract, characters 1240–1487 · show in text ↑
t0

“Pharbitis nil”

✓ located verbatim in the source · title, characters 74–87 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

A red-light night break strongly inhibited PN1 and PN9 mRNA accumulation.

Taxon
Pharbitis nilIpomoea nilt0
Treatment
red light night breake0
Gene
PN1 and PN9e0
Outcome
accumulation of both PN1 and PN9 mRNAe0
Direction
inhibitede0
Comparator
inductive dark periode0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ipomoea nil
Ipomoea nil · TaxonKENPEI · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Brief illumination of an inductive dark period by a red light night break strongly inhibited the accumulation of both PN1 and PN9 mRNA.”

✓ located verbatim in the source · abstract, characters 1489–1624 · show in text ↑
t0

“Pharbitis nil”

✓ located verbatim in the source · title, characters 74–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

PN1 and PN9 transcripts occurred in cotyledons and stems but not roots of competent seedlings.

Taxon
Pharbitis nilIpomoea nilt0
Organ / stage
photoperiodically competent seedlingse0
Gene
PN1 and PN9e1
Outcome
mRNA transcripts were detected in the cotyledons and stems, but not the rootse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ipomoea nil
Ipomoea nil · TaxonKENPEI · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“mRNA transcripts were detected in the cotyledons and stems, but not the roots, of photoperiodically competent seedlings”

✓ located verbatim in the source · abstract, characters 1692–1811 · show in text ↑
e1

“The expression of both PN1 and PN9 was spatially regulated”

✓ located verbatim in the source · abstract, characters 1625–1683 · show in text ↑
t0

“Pharbitis nil”

✓ located verbatim in the source · title, characters 74–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

PN1 and PN9 appeared to be single-copy genes.

Taxon
Pharbitis nilIpomoea nilt0
Gene
PN1 and PN9e0
Outcome
single-copy genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ipomoea nil
Ipomoea nil · TaxonKENPEI · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Both PN1 and PN9 appeared to be present as single-copy genes in the Pharbitis genome.”

✓ located verbatim in the source · abstract, characters 1813–1898 · show in text ↑
t0

“Pharbitis nil”

✓ located verbatim in the source · title, characters 74–87 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Sequence analysis did not identify PN1 and PN9.

Taxon
Pharbitis nilIpomoea nilt0
Outcome
identity of these genese0

Not reportedGene

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ipomoea nil
Ipomoea nil · TaxonKENPEI · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Sequence analysis has not determined the identity of these genes.”

✓ located verbatim in the source · abstract, characters 1899–1964 · show in text ↑
t0

“Pharbitis nil”

✓ located verbatim in the source · title, characters 74–87 · show in text ↑
Associationauthor interpretationoriginal resultmeasured

Claim · model-written summary

PN1 and PN9 mRNA accumulation closely paralleled photoperiodic floral induction, without establishing their involvement.

Taxon
Pharbitis nilIpomoea nilt0
Gene
PN1 and PN9e0
Outcome
photoperiodic floral inductione0
Qualifier
a clear involvement with this process cannot be establishede0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ipomoea nil
Ipomoea nil · TaxonKENPEI · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the accumulation of mRNAs corresponding to both PN1 and PN9 closely paralleled the process of photoperiodic floral induction in P. nil, but a clear involvement with this process cannot be established from our findings”

✓ located verbatim in the source · abstract, characters 1974–2191 · show in text ↑
t0

“Pharbitis nil”

✓ located verbatim in the source · title, characters 74–87 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

The authors suggest circadian-regulated expression interacting with darkness may regulate photoperiodic processes including flower induction.

Taxon
Pharbitis nilIpomoea nilt0
Outcome
flower inductione0
Qualifier
circadian-regulated gene expression interacting with darknesse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ipomoea nil
Ipomoea nil · TaxonKENPEI · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“circadian-regulated gene expression interacting with darkness may be involved in the regulation of photoperiodically controlled physiological processes, including flower induction”

✓ located verbatim in the source · abstract, characters 2494–2673 · show in text ↑
t0

“Pharbitis nil”

✓ located verbatim in the source · title, characters 74–87 · show in text ↑

light · molecular: expression · Ipomoea nil (Japanese morning glory)Positive and negative results

6 papers: 1 positive, 5 negative or no effect

4 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. negative

2 papers more in this group

See all 6 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.