Paper · 2015 · The Plant Cell

Transcription Factors SOD7/NGAL2 and DPA4/NGAL3 Act Redundantly to Regulate Seed Size by Directly Repressing KLU Expression in Arabidopsis thaliana

Yueying Zhang; Liang Du; Ran Xu; et al.

5
claims
10
verbatim quotes
89
citations
2
research areas
✓
Open access

Abstract

Although seed size is one of the most important agronomic traits in plants, the genetic and molecular mechanisms that set the final size of seeds are largely unknown. We previously identified the ubiquitin receptor DA1 as a negative regulator of seed size, and the Arabidopsis thaliana da1-1 mutant produces larger seeds than the wild type. Here, we describe a B3 domain transcriptional repressor NGATHA-like protein (NGAL2), encoded by the suppressor of da1-1 (SOD7), which acts maternally to regulate seed size by restricting cell proliferation in the integuments of ovules and developing seeds. Overexpression of SOD7 significantly decreases seed size of wild-type plants, while the simultaneous disruption of SOD7 and its closest homolog DEVELOPMENT-RELATED PcG TARGET IN THE APEX4 (DPA4/NGAL3) increases seed size. Genetic analyses indicate that SOD7 and DPA4 act in a common pathway with the seed size regulator KLU to regulate seed growth, but do so independently of DA1. Further results show that SOD7 directly binds to the promoter of KLUH (KLU) in vitro and in vivo and represses the expression of KLU. Therefore, our findings reveal the genetic and molecular mechanisms of SOD7, DPA4, and KLU in seed size regulation and suggest that they are promising targets for seed size improvement in crops.

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Claims 5

Mechanismobservedoriginal resultmeasured

Claim · model-written summary

NGAL2 acts maternally to restrict integument cell proliferation and regulate seed size.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
SOD7e0
Outcome
seed sizee0
Qualifier
restricting cell proliferation in the integuments of ovules and developing seedse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“NGAL2), encoded by the suppressor of da1-1 (SOD7), which acts maternally to regulate seed size by restricting cell proliferation in the integuments of ovules and developing seeds.”

✓ located verbatim in the source · abstract, characters 418–597 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 127–147 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

SOD7 overexpression significantly decreased seed size.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
Overexpression of SOD7e0
Gene
SOD7e0
Outcome
seed sizee0
Direction
decreasese0
Comparator
wild-type plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Overexpression of SOD7 significantly decreases seed size of wild-type plants”

✓ located verbatim in the source · abstract, characters 598–674 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 127–147 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Joint disruption of SOD7 and DPA4 increased seed size.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
simultaneous disruption of SOD7 and its closest homolog DEVELOPMENT-RELATED PcG TARGET IN THE APEX4 (DPA4/NGAL3)e0
Outcome
seed sizee0
Direction
increasese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the simultaneous disruption of SOD7 and its closest homolog DEVELOPMENT-RELATED PcG TARGET IN THE APEX4 (DPA4/NGAL3) increases seed size.”

✓ located verbatim in the source · abstract, characters 682–819 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 127–147 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

SOD7 and DPA4 act with KLU and independently of DA1 in seed growth.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
SOD7 and DPA4e0
Outcome
seed growthe0
Qualifier
common pathway with the seed size regulator KLUe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“SOD7 and DPA4 act in a common pathway with the seed size regulator KLU to regulate seed growth, but do so independently of DA1.”

✓ located verbatim in the source · abstract, characters 851–978 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 127–147 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

SOD7 bound the KLU promoter and repressed KLU expression.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
SOD7e0
Outcome
expression of KLUe0
Direction
repressese0
Qualifier
directly binds to the promoter of KLUH (KLU) in vitro and in vivoe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“SOD7 directly binds to the promoter of KLUH (KLU) in vitro and in vivo and represses the expression of KLU.”

✓ located verbatim in the source · abstract, characters 1005–1112 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 127–147 · show in text ↑

loss of function · yield · Arabidopsis thaliana (thale cress)Positive and negative results

18 papers: 5 positive, 13 negative or no effect

4 papers in the same direction as this paper · 13 in the opposite direction

  1. no effect
  2. no effect
  3. negative

14 papers more in this group

See all 18 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.