Paper · 2006 · PLANT PHYSIOLOGY

High-Affinity Nitrate Transport in Roots of Arabidopsis Depends on Expression of the NAR2-Like Gene AtNRT3.1

Mamoru Okamoto; Anshuman Kumar; Wenbin Li; et al.

11
claims
25
verbatim quotes
256
citations
2
research areas
✓
Open access

Abstract

The NAR2 protein of Chlamydomonas reinhardtii has no known transport activity yet it is required for high-affinity nitrate uptake. Arabidopsis (Arabidopsis thaliana) possesses two genes, AtNRT3.1 and AtNRT3.2, that are similar to the C. reinhardtii NAR2 gene. AtNRT3.1 accounts for greater than 99% of NRT3 mRNA and is induced 6-fold by nitrate. AtNRT3.2 was expressed constitutively at a very low level and did not compensate for the loss of AtNRT3.1 in two Atnrt3.1 mutants. Nitrate uptake by roots and nitrate induction of gene expression were analyzed in two T-DNA mutants, Atnrt3.1-1 and Atnrt3.1-2, disrupted in the AtNRT3.1 promoter and coding regions, respectively, in 5-week-old plants. Nitrate induction of the nitrate transporter genes AtNRT1.1 and AtNRT2.1 was reduced in Atnrt3.1 mutant plants, and this reduced expression was correlated with reduced nitrate concentrations in the tissues. Constitutive high-affinity influx was reduced by 34% and 89%, respectively, in Atnrt3.1-1 and Atnrt3.1-2 mutant plants, while high-affinity nitrate-inducible influx was reduced by 92% and 96%, respectively, following induction with 1 mm KNO(3) after 7 d of nitrogen deprivation. By contrast, low-affinity influx appeared to be unaffected. Thus, the constitutive high-affinity influx and nitrate-inducible high-affinity influx (but not the low-affinity influx) of higher plant roots require a functional AtNRT3 (NAR2) gene.

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Claims 11

Observationobservedoriginal resultmeasured

Claim · model-written summary

AtNRT3.1 accounted for more than 99% of NRT3 mRNA.

Taxon
ArabidopsisArabidopsist0
Gene
AtNRT3.1e0
Outcome
NRT3 mRNAe0
Value
greater than 99%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“AtNRT3.1 accounts for greater than 99% of NRT3 mRNA”

✓ located verbatim in the source · abstract, characters 260–311 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 44–55 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Nitrate induced AtNRT3.1 expression sixfold.

Taxon
ArabidopsisArabidopsist0
Treatment
nitratee0
Gene
AtNRT3.1e0
Outcome
NRT3 mRNAe0
Direction
inducede0
Value
6-folde0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“AtNRT3.1 accounts for greater than 99% of NRT3 mRNA and is induced 6-fold by nitrate.”

✓ located verbatim in the source · abstract, characters 260–345 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 44–55 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

AtNRT3.2 expression was constitutively very low.

Taxon
ArabidopsisArabidopsist0
Gene
AtNRT3.2e0
Outcome
expressed constitutively at a very low levele0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“AtNRT3.2 was expressed constitutively at a very low level”

✓ located verbatim in the source · abstract, characters 346–403 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 44–55 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

AtNRT3.2 did not compensate for AtNRT3.1 loss in two mutants.

Taxon
ArabidopsisArabidopsist0
Material
Atnrt3.1 mutantse0
Gene
AtNRT3.2e0
Outcome
did not compensate for the loss of AtNRT3.1e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“AtNRT3.2 was expressed constitutively at a very low level and did not compensate for the loss of AtNRT3.1 in two Atnrt3.1 mutants.”

✓ located verbatim in the source · abstract, characters 346–476 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 44–55 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Nitrate induction of AtNRT1.1 and AtNRT2.1 was reduced in Atnrt3.1 mutants.

Taxon
ArabidopsisArabidopsist0
Material
Atnrt3.1 mutant plantse0
Treatment
Nitratee0
Gene
AtNRT1.1 and AtNRT2.1e0
Outcome
induction of the nitrate transporter genese0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Nitrate induction of the nitrate transporter genes AtNRT1.1 and AtNRT2.1 was reduced in Atnrt3.1 mutant plants”

✓ located verbatim in the source · abstract, characters 696–806 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 44–55 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

Reduced transporter gene expression correlated with reduced tissue nitrate concentration.

Taxon
ArabidopsisArabidopsist0
Outcome
nitrate concentrations in the tissuese0
Direction
reducede0
Qualifier
reduced expressione0

Not reportedGene

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“this reduced expression was correlated with reduced nitrate concentrations in the tissues”

✓ located verbatim in the source · abstract, characters 812–901 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 44–55 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Constitutive high-affinity influx was reduced by 34% in Atnrt3.1-1.

Taxon
ArabidopsisArabidopsist0
Material
Atnrt3.1-1e0
Treatment
Atnrt3.1-1e0
Outcome
Constitutive high-affinity influxe0
Direction
reducede0
Value
34%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Constitutive high-affinity influx was reduced by 34% and 89%, respectively, in Atnrt3.1-1 and Atnrt3.1-2 mutant plants”

✓ located verbatim in the source · abstract, characters 903–1021 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 44–55 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Constitutive high-affinity influx was reduced by 89% in Atnrt3.1-2.

Taxon
ArabidopsisArabidopsist0
Material
Atnrt3.1-2e0
Treatment
Atnrt3.1-2e0
Outcome
Constitutive high-affinity influxe0
Direction
reducede0
Value
89%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Constitutive high-affinity influx was reduced by 34% and 89%, respectively, in Atnrt3.1-1 and Atnrt3.1-2 mutant plants”

✓ located verbatim in the source · abstract, characters 903–1021 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 44–55 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Inducible high-affinity influx was reduced by 92% in Atnrt3.1-1.

Taxon
ArabidopsisArabidopsist0
Material
Atnrt3.1-1e1
Treatment
1 mm KNO(3)e0
Outcome
high-affinity nitrate-inducible influxe0
Direction
reducede0
Value
92%e0
Qualifier
after 7 d of nitrogen deprivatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“high-affinity nitrate-inducible influx was reduced by 92% and 96%, respectively, following induction with 1 mm KNO(3) after 7 d of nitrogen deprivation.”

✓ located verbatim in the source · abstract, characters 1029–1181 · show in text ↑
e1

“Atnrt3.1-1 and Atnrt3.1-2 mutant plants”

✓ located verbatim in the source · abstract, characters 982–1021 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 44–55 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Inducible high-affinity influx was reduced by 96% in Atnrt3.1-2.

Taxon
ArabidopsisArabidopsist0
Material
Atnrt3.1-2e1
Treatment
1 mm KNO(3)e0
Outcome
high-affinity nitrate-inducible influxe0
Direction
reducede0
Value
96%e0
Qualifier
after 7 d of nitrogen deprivatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“high-affinity nitrate-inducible influx was reduced by 92% and 96%, respectively, following induction with 1 mm KNO(3) after 7 d of nitrogen deprivation.”

✓ located verbatim in the source · abstract, characters 1029–1181 · show in text ↑
e1

“Atnrt3.1-1 and Atnrt3.1-2 mutant plants”

✓ located verbatim in the source · abstract, characters 982–1021 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 44–55 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Low-affinity influx appeared unaffected by AtNRT3.1 mutation.

Taxon
ArabidopsisArabidopsist0
Treatment
Atnrt3.1 mutant plantse1
Outcome
low-affinity influxe0
Direction
unaffectede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“By contrast, low-affinity influx appeared to be unaffected.”

✓ located verbatim in the source · abstract, characters 1182–1241 · show in text ↑
e1

“Atnrt3.1 mutant plants”

✓ located verbatim in the source · abstract, characters 784–806 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 44–55 · show in text ↑

nitrogen · molecular: expression · ArabidopsisPositive and negative results

18 papers: 6 positive, 12 negative or no effect

5 papers in the same direction as this paper · 12 in the opposite direction

  1. positive
  2. negative
  3. no effect

14 papers more in this group

See all 18 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.