Paper · 2001 · Journal of Bacteriology

Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum

Silvina L. López-Garcı́a; Tirso E. E. Vázquez; Gabriel Favelukes; et al.

16
claims
34
verbatim quotes
25
citations
2
research areas
✓
Open access · other-oa

Abstract

In this study, we addressed the effects of N limitation in Bradyrhizobium japonicum for its association with soybean roots. The wild-type strain LP 3001 grew for six generations with a growth rate of 1.2 day(-1) in a minimal medium with 28 mM mannitol as the carbon source and with the N source [(NH(4))(2)SO(4)] limited to only 20 microM. Under these conditions, the glutamine synthetase (GS) activity was five to six times higher than in similar cultures grown with 1 or 0.1 mM (NH(4))(2)SO(4). The NtrBC-inducible GSII form of this enzyme accounted for 60% of the specific activity in N-starved rhizobia, being negligible in the other two cultures. The exopolysaccharide (EPS) and capsular polysaccharide (CPS) contents relative to cell protein were significantly higher in the N-starved cultures, but on the other hand, the poly-3-hydroxybutyrate level did not rise in comparison with N-sufficient cultures. In agreement with the accumulation of CPS in N-starved cultures, soybean lectin (SBL) binding as well as stimulation of rhizobial adsorption to soybean roots by SBL pretreatment were higher. The last effect was evident only in cultures that had not entered stationary phase. We also studied nodC gene induction in relation to N starvation. In the chromosomal nodC::lacZ fusion Bj110-573, nodC gene expression was induced by genistein 2.7-fold more in N-starved young cultures than in nonstarved ones. In stationary-phase cultures, nodC gene expression was similarly induced in N-limited cultures, but induction was negligible in cultures limited by another nutrient. Nodulation profiles obtained with strain LP 3001 grown under N starvation indicated that these cultures nodulated faster. In addition, as culture age increased, the nodulation efficiency decreased for two reasons: fewer nodules were formed, and nodulation was delayed. However, their relative importance was different according to the nutrient condition: in older cultures the overall decrease in the number of nodules was the main effect in N-starved cultures, whereas a delay in nodulation was more responsible for a loss in efficiency of N-sufficient cultures. Competition for nodulation was studied with young cultures of two wild-type strains differing only in their antibiotic resistance, the N-starved cultures being the most competitive.

Abstract from the paper’s OpenAlex record; open copy licensed other-oa. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 16

Observationobservedoriginal resultmeasured

Claim · model-written summary

Nitrogen-starved rhizobia grew for six generations at 1.2 day(-1).

Taxon
SoybeanGlycine maxt0
Treatment
20 microMe0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Outcome
growth ratee0
Value
1.2 day(-1)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The wild-type strain LP 3001 grew for six generations with a growth rate of 1.2 day(-1) in a minimal medium with 28 mM mannitol as the carbon source and with the N source [(NH(4))(2)SO(4)] limited to only 20 microM.”

✓ located verbatim in the source · abstract, characters 124–339 · show in text ↑
t0

“Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Nitrogen starvation raised rhizobial glutamine synthetase activity five to sixfold.

Taxon
SoybeanGlycine maxt0
Treatment
N-Starvedt0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Gene
glutamine synthetase (GS)e0
Outcome
glutamine synthetase (GS) activitye0
Direction
highere0
Value
five to six timese0
Comparator
1 or 0.1 mM (NH(4))(2)SO(4)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Under these conditions, the glutamine synthetase (GS) activity was five to six times higher than in similar cultures grown with 1 or 0.1 mM (NH(4))(2)SO(4).”

✓ located verbatim in the source · abstract, characters 340–496 · show in text ↑
t0

“Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

GSII accounted for 60% of enzyme activity in nitrogen-starved rhizobia and was negligible in other cultures.

Taxon
SoybeanGlycine maxt0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Gene
GSIIe0
Outcome
specific activitye0
Value
60%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The NtrBC-inducible GSII form of this enzyme accounted for 60% of the specific activity in N-starved rhizobia, being negligible in the other two cultures.”

✓ located verbatim in the source · abstract, characters 497–651 · show in text ↑
t0

“Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Nitrogen starvation increased rhizobial exopolysaccharide content.

Taxon
SoybeanGlycine maxt0
Treatment
N-starved culturese0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Outcome
exopolysaccharide (EPS)e0
Direction
highere0
Comparator
N-sufficient culturese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The exopolysaccharide (EPS) and capsular polysaccharide (CPS) contents relative to cell protein were significantly higher in the N-starved cultures, but on the other hand, the poly-3-hydroxybutyrate level did not rise in comparison with N-sufficient cultures.”

✓ located verbatim in the source · abstract, characters 652–911 · show in text ↑
t0

“Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Nitrogen starvation increased rhizobial capsular polysaccharide content.

Taxon
SoybeanGlycine maxt0
Treatment
N-starved culturese0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Outcome
capsular polysaccharide (CPS) contentse0
Direction
highere0
Comparator
N-sufficient culturese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The exopolysaccharide (EPS) and capsular polysaccharide (CPS) contents relative to cell protein were significantly higher in the N-starved cultures, but on the other hand, the poly-3-hydroxybutyrate level did not rise in comparison with N-sufficient cultures.”

✓ located verbatim in the source · abstract, characters 652–911 · show in text ↑
t0

“Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Poly-3-hydroxybutyrate did not rise under nitrogen starvation.

Taxon
SoybeanGlycine maxt0
Treatment
N-starved culturese1
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Outcome
poly-3-hydroxybutyrate levele0
Direction
did not risee0
Comparator
N-sufficient culturese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“the poly-3-hydroxybutyrate level did not rise in comparison with N-sufficient cultures.”

✓ located verbatim in the source · abstract, characters 824–911 · show in text ↑
t0

“Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
e1

“The exopolysaccharide (EPS) and capsular polysaccharide (CPS) contents relative to cell protein were significantly higher in the N-starved cultures, but on the other hand, the poly-3-hydroxybutyrate level did not rise in comparison with N-sufficient cultures.”

✓ located verbatim in the source · abstract, characters 652–911 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Soybean lectin binding was higher in nitrogen-starved cultures.

Taxon
SoybeanGlycine maxe0
Treatment
N-starved culturese1
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Outcome
soybean lectin (SBL) bindinge0
Direction
highere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“soybean lectin (SBL) binding as well as stimulation of rhizobial adsorption to soybean roots by SBL pretreatment were higher.”

✓ located verbatim in the source · abstract, characters 977–1102 · show in text ↑
t0

“Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
e1

“The exopolysaccharide (EPS) and capsular polysaccharide (CPS) contents relative to cell protein were significantly higher in the N-starved cultures, but on the other hand, the poly-3-hydroxybutyrate level did not rise in comparison with N-sufficient cultures.”

✓ located verbatim in the source · abstract, characters 652–911 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

SBL pretreatment stimulated rhizobial adsorption to soybean roots more in nitrogen-starved young cultures.

Taxon
SoybeanGlycine maxe0
Treatment
SBL pretreatmente0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Outcome
rhizobial adsorption to soybean rootse0
Direction
highere0
Qualifier
cultures that had not entered stationary phasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“stimulation of rhizobial adsorption to soybean roots by SBL pretreatment were higher. The last effect was evident only in cultures that had not entered stationary phase.”

✓ located verbatim in the source · abstract, characters 1017–1186 · show in text ↑
t0

“Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Genistein induced nodC expression 2.7-fold more in nitrogen-starved young cultures.

Taxon
SoybeanGlycine maxt0
Treatment
genisteine0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Gene
nodCe0
Outcome
nodC gene expressione0
Direction
moree0
Value
2.7-folde0
Comparator
nonstarved onese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“In the chromosomal nodC::lacZ fusion Bj110-573, nodC gene expression was induced by genistein 2.7-fold more in N-starved young cultures than in nonstarved ones.”

✓ located verbatim in the source · abstract, characters 1252–1412 · show in text ↑
t0

“Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

In stationary phase, nodC induction persisted under nitrogen limitation but was negligible under other nutrient limitation.

Taxon
SoybeanGlycine maxt0
Treatment
N-limited culturese0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Gene
nodCe0
Outcome
nodC gene expressione0
Direction
similarly inducede0
Comparator
cultures limited by another nutriente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“In stationary-phase cultures, nodC gene expression was similarly induced in N-limited cultures, but induction was negligible in cultures limited by another nutrient.”

✓ located verbatim in the source · abstract, characters 1413–1578 · show in text ↑
t0

“Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Nitrogen-starved cultures nodulated soybean faster.

Taxon
SoybeanGlycine maxt0
Treatment
N starvatione0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Outcome
Nodulatione0
Direction
fastere0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Nodulation profiles obtained with strain LP 3001 grown under N starvation indicated that these cultures nodulated faster.”

✓ located verbatim in the source · abstract, characters 1579–1700 · show in text ↑
t0

“Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

Older cultures formed fewer nodules.

Taxon
SoybeanGlycine maxt0
Organ / stage
culture agee0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Outcome
nodulese0
Direction
fewere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“as culture age increased, the nodulation efficiency decreased for two reasons: fewer nodules were formed, and nodulation was delayed.”

✓ located verbatim in the source · abstract, characters 1714–1847 · show in text ↑
t0

“Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

Older cultures had delayed nodulation.

Taxon
SoybeanGlycine maxt0
Organ / stage
culture agee0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Outcome
nodulatione0
Direction
delayede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“as culture age increased, the nodulation efficiency decreased for two reasons: fewer nodules were formed, and nodulation was delayed.”

✓ located verbatim in the source · abstract, characters 1714–1847 · show in text ↑
t0

“Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

With age, fewer nodules chiefly reduced efficiency of nitrogen-starved cultures.

Taxon
SoybeanGlycine maxt0
Treatment
N-starved culturese0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Outcome
number of nodulese0
Direction
decreasee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“in older cultures the overall decrease in the number of nodules was the main effect in N-starved cultures”

✓ located verbatim in the source · abstract, characters 1934–2039 · show in text ↑
t0

“Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

With age, nodulation delay chiefly reduced efficiency of nitrogen-sufficient cultures.

Taxon
SoybeanGlycine maxt0
Treatment
N-sufficient culturese0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Outcome
nodulatione0
Direction
delaye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“a delay in nodulation was more responsible for a loss in efficiency of N-sufficient cultures.”

✓ located verbatim in the source · abstract, characters 2049–2142 · show in text ↑
t0

“Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Nitrogen-starved young cultures were most competitive for nodulation.

Taxon
SoybeanGlycine maxt0
Treatment
N-starved culturese0
Interactor
Bradyrhizobium japonicumBradyrhizobium japonicumt0symbiont
Outcome
competitivee0
Direction
most competitivee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Bradyrhizobium japonicum
Bradyrhizobium japonicum · InteractorLouisa Howard - Dartmouth Electron Microscope Facility · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Competition for nodulation was studied with young cultures of two wild-type strains differing only in their antibiotic resistance, the N-starved cultures being the most competitive.”

✓ located verbatim in the source · abstract, characters 2143–2324 · show in text ↑
t0

“Improved Soybean Root Association of N-Starved Bradyrhizobium japonicum”

✓ located verbatim in the source · title, characters 0–71 · show in text ↑

nitrogen · Bradyrhizobium japonicum · Glycine max (soybean)Positive and negative results

11 papers: 5 positive, 6 negative or no effect

5 papers in the same direction as this paper · 5 in the opposite direction

This paper is about lacking the nutrient, so it counts the other way round here.

  1. positive
  2. positive
  3. positive

7 papers more in this group

See all 11 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.