Paper · 2010 · Australian Journal of Crop Science

Agrobacterium tumefaciens-mediated transformation of the isopentenyltransferase gene in japonica rice suspension cell culture

Alina Wagiran; Ismanizan Ismail; Che Radziah Che Mohd Zain; et al.

12
claims
21
verbatim quotes
13
citations
3
research areas
—
Not open access

Abstract

The global population is expected to grow from 6 to 8 billion people and rice consumers are projected to increase by 1.8% annually until 2020. Hence, rice production must be increased between 25-45% to fulfill the growing need. Efforts to genetically improve rice for high quality grains are extensively being carried out. The cloning vectors containing the ipt gene driven by the glutenin high molecular weight promoter were successfully constructed in pCAMBIA1305.2 and transformed into A. tumefaciens LBA4404, which were then used in the genetic transformation of a japonica suspension cell culture. The highest percentage of transformation frequency based on GUS activity was 93% in the variety Hayahishiki and 77% in Nippon Bare when 200 µM AS was included in the inoculation media. The highest percentage of GUS activity was 30% in the variety Fujisaka 5 in the presence of 100 µM AS. There was no difference in terms of GUS expression when different inoculation times were tested. A twenty minute post-dehydration treatment led to the highest GUS activity in all varieties tested. The inclusion of AS is critical and very important to obtain successful transformation. The sensitivity and response of suspension cells to different hygromycin concentrations was varied among the varieties tested. Selection of transformed cells in N6 liquid media containing 25 mg/L hygromycin proved to be easy and facilitated the removal of non-transformed cells. PCR analysis has shown that 2.3% of the putatively transformed rice variety Nippon Bare contained the ipt gene, while only 2.0% for the Hayahishiki variety. The finding of this research shows the potential for rice suspension cells in regeneration and genetic transformation systems by providing continuous explants and could be used as tools to obtain large scale transformation of rice plants via Agrobacterium tumefaciens.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 12

Observationobservedoriginal resultmeasured

Claim · model-written summary

The cloning vectors containing the ipt gene driven by the glutenin high molecular weight promoter were successfully constructed in pCAMBIA1305.2 and transformed into A. tumefaciens LBA4404

Interactor
A. tumefaciens LBA4404Agrobacterium tumefaciense0other
Gene
ipt genee0
Outcome
cloning vectors containing the ipt genee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗
Agrobacterium tumefaciens
Agrobacterium tumefaciens · InteractorClemson University - USDA Cooperative Extension Slide Series, Bugwood.org · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The cloning vectors containing the ipt gene driven by the glutenin high molecular weight promoter were successfully constructed in pCAMBIA1305.2 and transformed into A. tumefaciens LBA4404”

✓ located verbatim in the source · abstract, characters 323–511 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 97–101 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The highest percentage of transformation frequency based on GUS activity was 93% in the variety Hayahishiki and 77% in Nippon Bare when 200 µM AS was included in the inoculation media

Material
Hayahishikie0
Treatment
200 µM ASe0
Outcome
transformation frequency based on GUS activitye0
Direction
higheste0
Value
93%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The highest percentage of transformation frequency based on GUS activity was 93% in the variety Hayahishiki and 77% in Nippon Bare when 200 µM AS was included in the inoculation media”

✓ located verbatim in the source · abstract, characters 603–786 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 97–101 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Nippon Bare transformation frequency was 77% with 200 µM AS.

Material
Nippon Baree0
Treatment
200 µM ASe0
Outcome
transformation frequency based on GUS activitye0
Direction
higheste0
Value
77%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The highest percentage of transformation frequency based on GUS activity was 93% in the variety Hayahishiki and 77% in Nippon Bare when 200 µM AS was included in the inoculation media”

✓ located verbatim in the source · abstract, characters 603–786 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 97–101 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The highest percentage of GUS activity was 30% in the variety Fujisaka 5 in the presence of 100 µM AS

Material
Fujisaka 5e0
Treatment
100 µM ASe0
Outcome
GUS activitye0
Direction
higheste0
Value
30%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The highest percentage of GUS activity was 30% in the variety Fujisaka 5 in the presence of 100 µM AS”

✓ located verbatim in the source · abstract, characters 788–889 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 97–101 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

There was no difference in terms of GUS expression when different inoculation times were tested

Treatment
different inoculation timese0
Outcome
GUS expressione0
Direction
no differencee0
Comparator
different inoculation timese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“There was no difference in terms of GUS expression when different inoculation times were tested”

✓ located verbatim in the source · abstract, characters 891–986 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 97–101 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

A twenty minute post-dehydration treatment led to the highest GUS activity in all varieties tested

Treatment
twenty minute post-dehydration treatmente0
Outcome
GUS activitye0
Direction
higheste0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“A twenty minute post-dehydration treatment led to the highest GUS activity in all varieties tested”

✓ located verbatim in the source · abstract, characters 988–1086 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 97–101 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The inclusion of AS is critical and very important to obtain successful transformation

Outcome
inclusion of AS is critical and very important to obtain successful transformatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The inclusion of AS is critical and very important to obtain successful transformation”

✓ located verbatim in the source · abstract, characters 1088–1174 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 97–101 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

The sensitivity and response of suspension cells to different hygromycin concentrations was varied among the varieties tested

Material
varieties testede0
Treatment
different hygromycin concentrationse0
Outcome
sensitivity and response of suspension cellse0
Direction
variede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The sensitivity and response of suspension cells to different hygromycin concentrations was varied among the varieties tested”

✓ located verbatim in the source · abstract, characters 1176–1301 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 97–101 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Selection of transformed cells in N6 liquid media containing 25 mg/L hygromycin proved to be easy and facilitated the removal of non-transformed cells

Treatment
N6 liquid media containing 25 mg/L hygromycine0
Outcome
removal of non-transformed cellse0
Direction
facilitatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Selection of transformed cells in N6 liquid media containing 25 mg/L hygromycin proved to be easy and facilitated the removal of non-transformed cells”

✓ located verbatim in the source · abstract, characters 1303–1453 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 97–101 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

2.3% of the putatively transformed rice variety Nippon Bare contained the ipt gene

Material
Nippon Baree0
Gene
ipt genee0
Outcome
contained the ipt genee0
Value
2.3%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“2.3% of the putatively transformed rice variety Nippon Bare contained the ipt gene”

✓ located verbatim in the source · abstract, characters 1483–1565 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Only 2.0% of putatively transformed Hayahishiki contained ipt.

Material
Hayahishikie0
Gene
ipt genee0
Outcome
putatively transformed ricee0
Value
2.0%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“2.3% of the putatively transformed rice variety Nippon Bare contained the ipt gene, while only 2.0% for the Hayahishiki variety”

✓ located verbatim in the source · abstract, characters 1483–1610 · show in text ↑
Method / resourceauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

rice suspension cells in regeneration and genetic transformation systems by providing continuous explants and could be used as tools to obtain large scale transformation of rice plants

Outcome
rice suspension cells in regeneration and genetic transformation systemse0
Value
large scalee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“rice suspension cells in regeneration and genetic transformation systems by providing continuous explants and could be used as tools to obtain large scale transformation of rice plants”

✓ located verbatim in the source · abstract, characters 1665–1849 · show in text ↑

inoculation · molecular: expression · Oryza sativa (rice)Positive and negative results

56 papers: 51 positive, 5 negative or no effect

4 papers in the same direction as this paper · 51 reporting no difference from an alternative

  1. positive
  2. positive
  3. positive

52 papers more in this group

See all 56 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.