Paper · 2016 · New Phytologist

A pulse‐chase strategy for EdU labelling assay is able to rapidly quantify cell division orientation

Xiaofeng Yin; Hirokazu Tsukaya

7
claims
7
verbatim quotes
28
citations
2
research areas
✓
Open access

Abstract

Measurement of the direction of cell division is an important, yet difficult, task to analyse how a plant organ acquires its final shape from an initially small group of cells. We introduce a method that rapidly and easily quantifies cell division direction and is applicable to all plant species. A pulse-chase strategy for 5-ethynyl-2'-deoxyuridine (EdU) labelling assay was established and was shown to be successful for leaves of Arabidopsis thaliana (Arabidopsis) and Juncus prismatocarpus. By optimization of the pulse and chase periods, most of the signals obtained were sets of daughter nuclei. For Arabidopsis, the optimal time was a 45-min pulse and a 7-h chase. For J. prismatocarpus, the optimal time was a 2-h pulse and a 13.5-h chase. The positions of the daughter nuclei were used to quantify cell division direction in the Arabidopsis leaf primordia. Overall, cell division along the proximal-distal axis was more frequent than along the medial-lateral axis. In petiole, major vein, minor vein and margin areas, the major cell division direction seemed to be coincident with the direction of auxin flow. The advantages of our method over the few methods used previously are discussed. We anticipate that it will provide opportunities to study plant development in the near future.

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Claims 7

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The assay worked in Arabidopsis leaves.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Organ / stage
leavese0
Outcome
successfule0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“was shown to be successful for leaves of Arabidopsis thaliana (Arabidopsis) and Juncus prismatocarpus”

✓ located verbatim in the source · abstract, characters 393–494 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The assay worked in Juncus leaves.

Taxon
Juncus prismatocarpusJuncus prismatocarpuse0
Organ / stage
leavese0
Outcome
successfule0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Juncus prismatocarpus
Juncus prismatocarpus · TaxonJohn Tann from Sydney, Australia · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“was shown to be successful for leaves of Arabidopsis thaliana (Arabidopsis) and Juncus prismatocarpus”

✓ located verbatim in the source · abstract, characters 393–494 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Optimized pulse and chase periods yielded mostly daughter-nucleus sets.

Outcome
most of the signals obtained were sets of daughter nucleie0
Value
moste0

Not reportedTaxon

Verbatim

e0

“By optimization of the pulse and chase periods, most of the signals obtained were sets of daughter nuclei.”

✓ located verbatim in the source · abstract, characters 496–602 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The Arabidopsis optimum was 45-minute pulse and 7-hour chase.

Taxon
ArabidopsisArabidopsise0
Outcome
optimal timee0
Value
a 45-min pulse and a 7-h chasee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“For Arabidopsis, the optimal time was a 45-min pulse and a 7-h chase.”

✓ located verbatim in the source · abstract, characters 603–672 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The Juncus optimum was 2-hour pulse and 13.5-hour chase.

Taxon
J. prismatocarpusJuncus prismatocarpuse0
Outcome
optimal timee0
Value
a 2-h pulse and a 13.5-h chasee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Juncus prismatocarpus
Juncus prismatocarpus · TaxonJohn Tann from Sydney, Australia · CC BY 2.0 · Wikimedia Commons ↗

Verbatim

e0

“For J. prismatocarpus, the optimal time was a 2-h pulse and a 13.5-h chase.”

✓ located verbatim in the source · abstract, characters 673–748 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Proximal-distal division was more frequent than medial-lateral division in Arabidopsis leaf primordia.

Outcome
cell division along the proximal-distal axise0
Direction
more frequente0
Comparator
along the medial-lateral axise0

Not reportedTaxon

Verbatim

e0

“Overall, cell division along the proximal-distal axis was more frequent than along the medial-lateral axis.”

✓ located verbatim in the source · abstract, characters 867–974 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Division direction in petiole, veins and margins seemed aligned with auxin flow.

Organ / stage
petiole, major vein, minor vein and margin arease0
Outcome
major cell division directione0
Qualifier
seemed to be coincident with the direction of auxin flowe0

Not reportedTaxonDirection

Verbatim

e0

“In petiole, major vein, minor vein and margin areas, the major cell division direction seemed to be coincident with the direction of auxin flow.”

✓ located verbatim in the source · abstract, characters 975–1119 · show in text ↑