Paper · 2011 · Acta Agriculturae Boreali-Sinica

The Allelic Specific PCR Marker and Diversity of HMW-GS Genes in Dasypyum villosum

Guangtian Liu

9
claims
16
verbatim quotes
0
citations
3
research areas
—
Not open access

Abstract

D.villosum is a rich reservoir for genic diversity of High-Molecular-Weight glutenin subunit(HMW-GS).In this paper,one Allelic Specific PCR(AS-PCR)marker for the amplification of the genes coding HMW-GS of D.villosum was developed on the basis of the sequences of 1Va,1Vb,1Vc and common wheat HMW glutenin genes.PCR analysis on HMW glutenin genes of CS and its addition lines showed the specialty of this AS-PCR marker,while analysis on HMW-GS genes of six accessions of D.villosum showed a high degree of length polymorphism,which suggested that the size variation observed in different allelic subunits of D.villosum was mainly due to the different length of the central repetitive domain.Using this AS-PCR marker,seven alleles at Glu-V1 were found among 108 H.villosum individuals from 18 accessions.The frequencies of those alleles were different.The allele b was found in all accessions except W6 7288,and its frequency was 59.55%of 108 individuals,while that of allele d was 25.19%.But allele a as well as f was only found once.Therefore,different genotypes were found in the different individuals from one accession due to the cross-pollination.

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Claims 9

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The AS-PCR marker specifically amplified HMW glutenin genes in CS and addition lines.

Taxon
D.villosume1
Outcome
specialty of this AS-PCR markere0
Comparator
CS and its addition linese0

Not reportedValue

Verbatim

e0

“PCR analysis on HMW glutenin genes of CS and its addition lines showed the specialty of this AS-PCR marker”

✓ located verbatim in the source · abstract, characters 312–418 · show in text ↑
e1

“HMW-GS of D.villosum”

✓ located verbatim in the source · abstract, characters 196–216 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

HMW-GS genes in six D. villosum accessions showed high length polymorphism.

Taxon
D.villosume0
Material
six accessionse0
Gene
HMW-GS genese0
Outcome
high degree of length polymorphisme0

Verbatim

e0

“analysis on HMW-GS genes of six accessions of D.villosum showed a high degree of length polymorphism”

✓ located verbatim in the source · abstract, characters 425–525 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Variation in allelic subunit size was attributed mainly to central repetitive domain length.

Taxon
D.villosume0
Outcome
size variation observed in different allelic subunitse0
Qualifier
different length of the central repetitive domaine0

Verbatim

e0

“the size variation observed in different allelic subunits of D.villosum was mainly due to the different length of the central repetitive domain”

✓ located verbatim in the source · abstract, characters 547–690 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Seven Glu-V1 alleles were found in 108 individuals from 18 accessions.

Taxon
Dasypyum villosumt0
Gene
Glu-V1e0
Outcome
alleles at Glu-V1e0
Value
seven allelese0
Qualifier
108 H.villosum individuals from 18 accessionse0

Verbatim

e0

“seven alleles at Glu-V1 were found among 108 H.villosum individuals from 18 accessions”

✓ located verbatim in the source · abstract, characters 716–802 · show in text ↑
t0

“Dasypyum villosum”

✓ located verbatim in the source · title, characters 65–82 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Allele b occurred in all accessions except W6 7288 at a frequency of 59.55%.

Taxon
Dasypyum villosumt0
Gene
allele be0
Outcome
frequencye0
Value
59.55%e0
Qualifier
all accessions except W6 7288e0

Verbatim

e0

“The allele b was found in all accessions except W6 7288,and its frequency was 59.55%of 108 individuals”

✓ located verbatim in the source · abstract, characters 851–953 · show in text ↑
t0

“Dasypyum villosum”

✓ located verbatim in the source · title, characters 65–82 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Allele d frequency was 25.19%.

Taxon
Dasypyum villosumt0
Gene
allele de0
Outcome
allele de0
Value
25.19%e0

Verbatim

e0

“that of allele d was 25.19%”

✓ located verbatim in the source · abstract, characters 960–987 · show in text ↑
t0

“Dasypyum villosum”

✓ located verbatim in the source · title, characters 65–82 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Allele a was found once.

Taxon
Dasypyum villosumt0
Gene
allele ae0
Outcome
only found oncee0

Verbatim

e0

“allele a as well as f was only found once”

✓ located verbatim in the source · abstract, characters 992–1033 · show in text ↑
t0

“Dasypyum villosum”

✓ located verbatim in the source · title, characters 65–82 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Allele f was found once.

Taxon
Dasypyum villosumt0
Gene
fe0
Outcome
only found oncee0

Verbatim

e0

“allele a as well as f was only found once”

✓ located verbatim in the source · abstract, characters 992–1033 · show in text ↑
t0

“Dasypyum villosum”

✓ located verbatim in the source · title, characters 65–82 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Different genotypes occurred among individuals within one accession, attributed to cross-pollination.

Taxon
Dasypyum villosumt0
Outcome
different genotypese0
Qualifier
cross-pollinatione0

Verbatim

e0

“different genotypes were found in the different individuals from one accession due to the cross-pollination”

✓ located verbatim in the source · abstract, characters 1044–1151 · show in text ↑
t0

“Dasypyum villosum”

✓ located verbatim in the source · title, characters 65–82 · show in text ↑