Paper · 2016 · Frontiers in Plant Science

Proteomic Studies on the Effects of Lipo-Chitooligosaccharide and Thuricin 17 under Unstressed and Salt Stressed Conditions in Arabidopsis thaliana

Sowmyalakshmi Subramanian; Alfred Souleimanov; Donald L. Smith

7
claims
11
verbatim quotes
64
citations
2
research areas
✓
Open access · cc-by

Abstract

Plants, being sessile organisms, are exposed to widely varying environmental conditions throughout their life cycle. Compatible plant-microbe interactions favor plant growth and development, and help plants deal with these environmental challenges. Microorganisms produce a diverse range of elicitor molecules to establish symbiotic relationships with the plants they associate with, in a given ecological niche. Lipo-chitooligosaccharide (LCO) and Thuricin 17 (Th17) are two such compounds shown to positively influence plant growth of both legumes and non-legumes. Arabidopsis thaliana responded positively to treatment with the bacterial signal compounds LCO and Th17 in the presence of salt stress (up to 250 mM NaCl). Shotgun proteomics of unstressed and 250 mM NaCl stressed A. thaliana rosettes (7 days post stress) in combination with the LCO and Th17 revealed many known, putative, hypothetical, and unknown proteins. Overall, carbon and energy metabolic pathways were affected under both unstressed and salt stressed conditions when treated with these signals. PEP carboxylase, Rubisco-oxygenase large subunit, pyruvate kinase, and proteins of photosystems I and II were some of the noteworthy proteins enhanced by the signals, along with other stress related proteins. These findings suggest that the proteome of A. thaliana rosettes is altered by the bacterial signals tested, and more so under salt stress, thereby imparting a positive effect on plant growth under high salt stress. The roles of the identified proteins are discussed here in relation to salt stress adaptation, which, when translated to field grown crops can be a crucial component and of significant importance in agriculture and global food production. The mass spectrometry proteomics data have been deposited to the ProteomeXchange with identifier PXD004742.

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The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 7

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Arabidopsis thaliana responded positively to LCO and Th17 treatment under salt stress up to 250 mM NaCl.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Treatment
bacterial signal compounds LCO and Th17e1
Outcome
respondede1
Direction
positivelye1
Qualifier
in the presence of salt stress (up to 250 mM NaCl)e1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Arabidopsis thaliana responded positively to treatment with the bacterial signal compounds LCO and Th17 in the presence of salt stress (up to 250 mM NaCl)”

✓ located verbatim in the source · abstract, characters 567–721 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Shotgun proteomics of unstressed and 250 mM NaCl stressed A. thaliana rosettes revealed many known, putative, hypothetical and unknown proteins.

Taxon
A. thalianaArabidopsis thalianae2
Organ / stage
rosettese2
Outcome
proteinse2
Qualifier
many known, putative, hypothetical, and unknown proteinse2

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e2

“Shotgun proteomics of unstressed and 250 mM NaCl stressed A. thaliana rosettes (7 days post stress) in combination with the LCO and Th17 revealed many known, putative, hypothetical, and unknown proteins”

✓ located verbatim in the source · abstract, characters 723–925 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Carbon and energy metabolic pathways were affected under both unstressed and salt-stressed conditions when treated with LCO and Th17.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
these signalse3
Outcome
carbon and energy metabolic pathwayse3
Qualifier
under both unstressed and salt stressed conditionse3

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 127–147 · show in text ↑
e3

“Overall, carbon and energy metabolic pathways were affected under both unstressed and salt stressed conditions when treated with these signals”

✓ located verbatim in the source · abstract, characters 927–1069 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

PEP carboxylase, Rubisco-oxygenase large subunit and pyruvate kinase were enhanced by the signals.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
the signalse4
Gene
PEP carboxylase, Rubisco-oxygenase large subunit, pyruvate kinasee4
Outcome
proteinse4
Direction
enhancede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 127–147 · show in text ↑
e4

“PEP carboxylase, Rubisco-oxygenase large subunit, pyruvate kinase, and proteins of photosystems I and II were some of the noteworthy proteins enhanced by the signals”

✓ located verbatim in the source · abstract, characters 1071–1236 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Proteins of photosystems I and II were enhanced by the signals.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
the signalse4
Gene
photosystems I and IIe4
Outcome
proteinse4
Direction
enhancede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 127–147 · show in text ↑
e4

“PEP carboxylase, Rubisco-oxygenase large subunit, pyruvate kinase, and proteins of photosystems I and II were some of the noteworthy proteins enhanced by the signals”

✓ located verbatim in the source · abstract, characters 1071–1236 · show in text ↑
Intervention effectauthor interpretationoriginal resultmeasured

Claim · model-written summary

The proteome of A. thaliana rosettes is altered by the bacterial signals tested, more so under salt stress.

Taxon
A. thalianaArabidopsis thalianae5
Organ / stage
rosettese5
Treatment
bacterial signals testede5
Outcome
proteomee5
Direction
alterede5
Qualifier
more so under salt stresse5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e5

“These findings suggest that the proteome of A. thaliana rosettes is altered by the bacterial signals tested, and more so under salt stress”

✓ located verbatim in the source · abstract, characters 1280–1418 · show in text ↑
Intervention effectauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

LCO and Th17 impart a positive effect on plant growth under high salt stress.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
high salt stresse6
Outcome
plant growthe6
Direction
positivee6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 127–147 · show in text ↑
e6

“thereby imparting a positive effect on plant growth under high salt stress”

✓ located verbatim in the source · abstract, characters 1420–1494 · show in text ↑

salinity · growth · Arabidopsis thaliana (thale cress)Positive and negative results

15 papers: 4 positive, 11 negative or no effect

3 papers in the same direction as this paper · 11 in the opposite direction

  1. negative
  2. no effect
  3. negative

11 papers more in this group

See all 15 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.