Paper · 2012

5-Azacytidine combined with 2,4-D improves somatic embryogenesis of Acca sellowiana (O. Berg) Burret by means of changes in global DNA methylation levels Hugo P. F. FragaLeila N. VieiraClarissa A. CaprestanoDouglas A. Steinmacher • Gustavo A. MickeDaniel A. SpudeitRosete PescadorMiguel P. Guerra

Douglas André Steinmacher; A. Spudeit

10
claims
21
verbatim quotes
0
citations
3
research areas
—
Not open access

Abstract

DNA methylation is an epigenetic regulatory mechanism of gene expression which can be associated with developmental phases and in vitro morphogenetic compe- tence in plants. The present work evaluated the effects of 5-azacytidine (AzaC) and 2,4-dichlorophenoxyacetic acid (2,4-D) on Acca sellowiana somatic embryogenesis (SE) and global DNA methylation levels by high-performance liquid chromatography mass spectrometry (HPLC/MS/MS). 2,4-D-free treatments revealed no somatic embryo formation in both accessions tested. Treatments supplemented with 2,4-D pulse plus AzaC in the culture medium resulted in increased embryo formation. In AzaC-free treatment, HPLC/MS/MS analysis showed a gradual increase in methylation levels in cultures of both accessions tested during SE induction. Treatment with AzaC and 2,4-D-free resulted in a marked decrease in methylation for both accessions, ranging from 37.6 to 20.8 %. In treatment with 2,4-D and AzaC combined, the 85 accession showed increasing global methylation levels. Otherwise, the 101X458 accession, in the same treatment, showed a decrease between 10 and 20 days, followed by an increase after 30 days (39.5, 36.2 and 41.6 %). These results indicate that 2,4-D pulse combined with AzaC improves SE induc- tion. However, the conversion phase showed that although positively influencing SE induction, AzaC had a dysregu- latory effect on the stage of autotrophic plant formation, resulting in significantly lower conversion rates. The results suggest that DNA methylation dramatically influences SE in Acca sellowiana, and global DNA methylation dynamics are related to morphogenetic response. Key message 5-Azacytidine combined with 2,4-D increases the number of Acca sellowiana somatic embryos. Global DNA methylation is directly affected by these compounds.

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Claims 10

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

In 2,4-D-free treatments no somatic embryos formed in either accession of Acca sellowiana.

Taxon
Acca sellowianaFeijoa sellowianae0
Treatment
2,4-D-freee1
Outcome
somatic embryo formatione1

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Feijoa sellowiana
Feijoa sellowiana · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The present work evaluated the effects of 5-azacytidine (AzaC) and 2,4-dichlorophenoxyacetic acid (2,4-D) on Acca sellowiana somatic embryogenesis (SE)”

✓ located verbatim in the source · abstract, characters 174–325 · show in text ↑
e1

“2,4-D-free treatments revealed no somatic embryo formation in both accessions tested”

✓ located verbatim in the source · abstract, characters 434–518 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

2,4-D pulse plus AzaC increased embryo formation in Acca sellowiana.

Taxon
Acca sellowianaFeijoa sellowianae0
Treatment
2,4-D pulse plus AzaCe1
Outcome
embryo formatione1
Direction
increasede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Feijoa sellowiana
Feijoa sellowiana · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The present work evaluated the effects of 5-azacytidine (AzaC) and 2,4-dichlorophenoxyacetic acid (2,4-D) on Acca sellowiana somatic embryogenesis (SE)”

✓ located verbatim in the source · abstract, characters 174–325 · show in text ↑
e1

“Treatments supplemented with 2,4-D pulse plus AzaC in the culture medium resulted in increased embryo formation”

✓ located verbatim in the source · abstract, characters 520–631 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

In AzaC-free treatment, global DNA methylation gradually increased during SE induction in both accessions.

Taxon
Acca sellowianaFeijoa sellowianae0
Organ / stage
during SE inductione1
Treatment
AzaC-free treatmente1
Outcome
methylation levelse1
Direction
increasee1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Feijoa sellowiana
Feijoa sellowiana · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The present work evaluated the effects of 5-azacytidine (AzaC) and 2,4-dichlorophenoxyacetic acid (2,4-D) on Acca sellowiana somatic embryogenesis (SE)”

✓ located verbatim in the source · abstract, characters 174–325 · show in text ↑
e1

“In AzaC-free treatment, HPLC/MS/MS analysis showed a gradual increase in methylation levels in cultures of both accessions tested during SE induction”

✓ located verbatim in the source · abstract, characters 633–782 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

AzaC combined with 2,4-D-free medium markedly decreased methylation in both accessions, ranging from 37.6 to 20.8 %.

Taxon
Acca sellowianaFeijoa sellowianae0
Treatment
AzaC and 2,4-D-freee1
Outcome
methylatione1
Direction
decreasee1
Value
37.6 to 20.8 %e1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Feijoa sellowiana
Feijoa sellowiana · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The present work evaluated the effects of 5-azacytidine (AzaC) and 2,4-dichlorophenoxyacetic acid (2,4-D) on Acca sellowiana somatic embryogenesis (SE)”

✓ located verbatim in the source · abstract, characters 174–325 · show in text ↑
e1

“Treatment with AzaC and 2,4-D-free resulted in a marked decrease in methylation for both accessions, ranging from 37.6 to 20.8 %”

✓ located verbatim in the source · abstract, characters 784–912 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

With 2,4-D and AzaC combined, the 85 accession showed increasing global methylation levels.

Taxon
Acca sellowianaFeijoa sellowianae0
Material
85 accessione1
Treatment
2,4-D and AzaC combinede1
Outcome
global methylation levelse1
Direction
increasinge1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Feijoa sellowiana
Feijoa sellowiana · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The present work evaluated the effects of 5-azacytidine (AzaC) and 2,4-dichlorophenoxyacetic acid (2,4-D) on Acca sellowiana somatic embryogenesis (SE)”

✓ located verbatim in the source · abstract, characters 174–325 · show in text ↑
e1

“In treatment with 2,4-D and AzaC combined, the 85 accession showed increasing global methylation levels”

✓ located verbatim in the source · abstract, characters 914–1017 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

With 2,4-D and AzaC combined, the 101X458 accession showed a decrease in methylation between 10 and 20 days.

Taxon
Acca sellowianaFeijoa sellowianae0
Material
101X458 accessione1
Treatment
2,4-D and AzaC combinede1
Outcome
global methylation levelse1
Direction
decreasee1
Qualifier
between 10 and 20 dayse1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Feijoa sellowiana
Feijoa sellowiana · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The present work evaluated the effects of 5-azacytidine (AzaC) and 2,4-dichlorophenoxyacetic acid (2,4-D) on Acca sellowiana somatic embryogenesis (SE)”

✓ located verbatim in the source · abstract, characters 174–325 · show in text ↑
e1

“In treatment with 2,4-D and AzaC combined, the 85 accession showed increasing global methylation levels. Otherwise, the 101X458 accession, in the same treatment, showed a decrease between 10 and 20 days, followed by an increase after 30 days (39.5, 36.2 and 41.6 %)”

✓ located verbatim in the source · abstract, characters 914–1179 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

With 2,4-D and AzaC combined, methylation in the 101X458 accession increased after 30 days, to 39.5, 36.2 and 41.6 %.

Taxon
Acca sellowianaFeijoa sellowianae0
Material
101X458 accessione1
Treatment
2,4-D and AzaC combinede1
Outcome
global methylation levelse1
Direction
increasee1
Value
39.5, 36.2 and 41.6 %e1
Qualifier
after 30 dayse1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Feijoa sellowiana
Feijoa sellowiana · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The present work evaluated the effects of 5-azacytidine (AzaC) and 2,4-dichlorophenoxyacetic acid (2,4-D) on Acca sellowiana somatic embryogenesis (SE)”

✓ located verbatim in the source · abstract, characters 174–325 · show in text ↑
e1

“In treatment with 2,4-D and AzaC combined, the 85 accession showed increasing global methylation levels. Otherwise, the 101X458 accession, in the same treatment, showed a decrease between 10 and 20 days, followed by an increase after 30 days (39.5, 36.2 and 41.6 %)”

✓ located verbatim in the source · abstract, characters 914–1179 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

AzaC significantly lowered conversion rates, with a dysregulatory effect on autotrophic plant formation.

Taxon
Acca sellowianaFeijoa sellowianae0
Organ / stage
autotrophic plant formatione1
Treatment
AzaCe2
Outcome
conversion ratese1
Direction
lowere1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Feijoa sellowiana
Feijoa sellowiana · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The present work evaluated the effects of 5-azacytidine (AzaC) and 2,4-dichlorophenoxyacetic acid (2,4-D) on Acca sellowiana somatic embryogenesis (SE)”

✓ located verbatim in the source · abstract, characters 174–325 · show in text ↑
e1

“on the stage of autotrophic plant formation, resulting in significantly lower conversion rates”

✓ located verbatim in the source · abstract, characters 1387–1481 · show in text ↑
e2

“although positively influencing SE induction, AzaC”

✓ located verbatim in the source · abstract, characters 1307–1357 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

AzaC positively influenced SE induction in Acca sellowiana.

Taxon
Acca sellowianaFeijoa sellowianae0
Treatment
AzaCe2
Outcome
SE inductione2
Direction
positively influencinge2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Feijoa sellowiana
Feijoa sellowiana · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The present work evaluated the effects of 5-azacytidine (AzaC) and 2,4-dichlorophenoxyacetic acid (2,4-D) on Acca sellowiana somatic embryogenesis (SE)”

✓ located verbatim in the source · abstract, characters 174–325 · show in text ↑
e2

“although positively influencing SE induction, AzaC”

✓ located verbatim in the source · abstract, characters 1307–1357 · show in text ↑
Associationauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors suggest that DNA methylation dramatically influences somatic embryogenesis in Acca sellowiana.

Taxon
Acca sellowianaFeijoa sellowianae0
Treatment
DNA methylatione1
Outcome
somatic embryogenesise0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Feijoa sellowiana
Feijoa sellowiana · TaxonDidier Descouens · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The present work evaluated the effects of 5-azacytidine (AzaC) and 2,4-dichlorophenoxyacetic acid (2,4-D) on Acca sellowiana somatic embryogenesis (SE)”

✓ located verbatim in the source · abstract, characters 174–325 · show in text ↑
e1

“The results suggest that DNA methylation dramatically influences SE in Acca sellowiana”

✓ located verbatim in the source · abstract, characters 1483–1569 · show in text ↑