Paper · 2013 · RWTH Publications (RWTH Aachen)

Mechanismen der Genregulation bei der 'geprimten' Stressantwort in Arabidopsis thaliana

Michał Jaśkiewicz; Uwe Conrath

6
claims
12
verbatim quotes
0
citations
2
research areas
✓
Open access · other-oa

Abstract

During evolution, plants developed various defense mechanisms against pathogens. One of these mechanisms is called systemic acquired resistance (SAR). SAR confers protection to a broad spectrum of pathogen and also to abiotic stress. SAR is associated with the expression of genes encoding pathogenesis–related proteins and with a process called “defense priming”. “Defense priming” enables the plant to respond to pathogen infection or abiotic stresses in a faster and stronger manner. It is assumed that defense priming is an important part of plant disease resistance and stress tolerance. One type of reaction that gets induced in a faster and more robust manner in primed plants is the induction of defense genes. Gene induction can be regulated in different ways. It is known that, amongst others, transcription factors and histones are important for gene regulation. Histones can be modified thereby controlling the accessibility of regulatory proteins to DNA and chromatin. Amongst the regulatory proteins are transcription factors. These proteins bind to regulatory DNA sequences or to chromatin and subsequent recruit proteins that are necessary for gene induction. In this work histone modifications on the promoters of “primed” genes were investigated. The results show that priming and SAR are associated with an increase of certain histone modifications on defense genes. The investigated genes belong to two different groups. On genes of the one group, – which encode so called WRKY transcription factors – an increase of normally transcription-associated histone modifications was observed. This observation suggests that the WRKY transcription factor genes become prepared (primed) for gene induction. The other group of genes encodes enzymes of the phenylpropanoid pathway and also shows changes in histone modifications. But, according to current knowledge no task can be assigned to these changes. Further experiments determined the role of heat shock transcription factor B1 (HSFB1), a transcription factor that is necessary for defense priming. It could be demonstrated that a mutation of the HSFB1 gene neither affects perception of a pathogen nor the systemic transmission of the SAR inducing signal(s). Although it was not possible to exactly determine the role of HSFB1 in priming, I could show that HSFB1 is a priming specific transcription factor.

Abstract from the paper’s OpenAlex record; open copy licensed other-oa. Read at the source ↗

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Claims 6

Associationobservedoriginal resultmeasured

Claim · model-written summary

Priming and SAR were associated with increased histone modifications on defense genes.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
defense genese0
Outcome
histone modifications on defense genese0
Direction
increasee0
Qualifier
priming and SARe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“priming and SAR are associated with an increase of certain histone modifications on defense genes.”

✓ located verbatim in the source · abstract, characters 1287–1385 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 67–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

WRKY transcription factor genes showed increased transcription-associated histone modifications.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Outcome
transcription-associated histone modificationse0
Direction
increasee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“an increase of normally transcription-associated histone modifications was observed.”

✓ located verbatim in the source · abstract, characters 1522–1606 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 67–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Phenylpropanoid-pathway genes also showed histone modification changes.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
enzymes of the phenylpropanoid pathwaye0
Outcome
changes in histone modificationse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The other group of genes encodes enzymes of the phenylpropanoid pathway and also shows changes in histone modifications.”

✓ located verbatim in the source · abstract, characters 1719–1839 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 67–87 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

HSFB1 mutation did not affect pathogen perception.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
mutation of the HSFB1 genee0
Gene
HSFB1e0
Outcome
perception of a pathogene0
Direction
neither affectse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“a mutation of the HSFB1 gene neither affects perception of a pathogen nor the systemic transmission of the SAR inducing signal(s).”

✓ located verbatim in the source · abstract, characters 2097–2227 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 67–87 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

HSFB1 mutation did not affect systemic SAR-signal transmission.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
mutation of the HSFB1 genee0
Gene
HSFB1e0
Outcome
systemic transmission of the SAR inducing signal(s)e0
Direction
neither affectse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“a mutation of the HSFB1 gene neither affects perception of a pathogen nor the systemic transmission of the SAR inducing signal(s).”

✓ located verbatim in the source · abstract, characters 2097–2227 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 67–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

HSFB1 was identified as a priming-specific transcription factor.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
HSFB1e0
Outcome
priming specific transcription factore0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“HSFB1 is a priming specific transcription factor.”

✓ located verbatim in the source · abstract, characters 2326–2375 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 67–87 · show in text ↑

heat · disease · Arabidopsis thaliana (thale cress)Positive and negative results

8 papers: 5 positive, 3 negative or no effect

2 papers in the same direction as this paper · 5 in the opposite direction

  1. positive
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loss of function · disease · Arabidopsis thaliana (thale cress)Positive and negative results

82 papers: 31 positive, 51 negative or no effect

50 papers in the same direction as this paper · 31 in the opposite direction

  1. positive
  2. positive
  3. positive

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.