loss of function · Disease · Arabidopsis thaliana (thale cress)

Positive and negative results82 papers: 31 positive, 51 negative or no effect

91 claims from these papers; 12 citations between them.

Papers here report positive and negative or no-effect results. No pair of them has been accepted in the claim-by-claim check.

How these papers cite each other

12 citations between these papers: 4 on the same side, 8 across the two sides.

Positive resultNegative result or no effect1995200020052010201520202025
  • Positive result
  • Negative result or no effect
  • Citation, pointing to the cited paper
  • Citation across the two sides
  • Larger circle: more citations overall

Years run left to right. Citations come from the papers’ OpenAlex reference lists. Hover a paper to bring forward its citations; click it to open the paper.

Papers reporting a positive result 31

  1. Common Virulence Factors for Bacterial Pathogenicity in Plants and Animals · 1995

  2. Molecular Characterization of a Putative Arabidopsis thaliana Copper Transporter and Its Yeast Homologue · 1995

  3. Molecular Analysis of Geminivirus ORFs on Symptom Development · 1999

  4. AtHKT1 is a salt tolerance determinant that controls Na + entry into plant roots · 2001

    cites 1 paper herecited by 1 paper here

  5. PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR1 Is a Plant-Specific SEC12-Related Protein That Enables the Endoplasmic Reticulum Exit of a High-Affinity Phosphate Transporter in Arabidopsis  [W] · 2005

  6. The fluorouridine insensitive 1 (fur1) mutant is defective in equilibrative nucleoside transporter 3 (ENT3), and thus represents an important pyrimidine nucleoside uptake system in Arabidopsis thaliana · 2007

  7. Silencing of poly(ADP-ribose) polymerase in plants alters abiotic stress signal transduction · 2007

  8. The Arabidopsis thaliana aquaglyceroporin AtNIP7;1 is a pathway for arsenite uptake · 2008

  9. A novel strategy for obtaining kanamycin resistance in Arabidopsis thaliana by silencing an endogenous gene encoding a putative chloroplast transporter · 2009

  10. Деструктивные детско-родительские отношения как фактор девиантного поведения подростков · 2010

  11. ADS1 encodes a MATE-transporter that negatively regulates plant disease resistance · 2011

  12. Suppression of Phospholipase Dγs Confers Increased Aluminum Resistance in Arabidopsis thaliana · 2011

  13. BSCTV C2 Attenuates the Degradation of SAMDC1 to Suppress DNA Methylation-Mediated Gene Silencing in Arabidopsis    · 2011

    cited by 1 paper here

  14. Arabidopsis acyl‐CoA‐binding protein ACBP3 participates in plant response to hypoxia by modulating very‐long‐chain fatty acid metabolism · 2014

    cites 1 paper here

  15. SnRK1 Phosphorylation of AL2 Delays Cabbage Leaf Curl Virus Infection in Arabidopsis · 2014

    cites 1 paper here

  16. Identification and analysis of E3 ligases and helper NLRs in plant immunity · 2017

  17. Indole-3-acetaldehyde dehydrogenase-dependent auxin synthesis contributes to virulence of Pseudomonas syringae strain DC3000 · 2018

    cited by 1 paper here

  18. HOS15 and HDA9 negatively regulate immunity through histone deacetylation of intracellular immune receptor NLR genes in Arabidopsis · 2019

    cited by 1 paper here

  19. EDS1-Dependent Cell Death and the Antioxidant System in Arabidopsis Leaves is Deregulated by the Mammalian Bax · 2020

  20. The glycosyltransferase UGT76B1 modulates N -hydroxy-pipecolic acid homeostasis and plant immunity · 2020

    cites 1 paper herecited by 1 paper here

  21. Phloem iron remodels root development in response to ammonium as the major nitrogen source · 2022

  22. Identification of positive and negative regulators of antiviral RNA interference in Arabidopsis thaliana · 2022

  23. The plant trans-Golgi network component ECHIDNA regulates defense, cell death, and endoplasmic reticulum stress · 2022

  24. The anion channel SLAH3 interacts with potassium channels to regulate nitrogen–potassium homeostasis and the membrane potential in Arabidopsis · 2023

  25. PP2C.D phosphatase SAL1 positively regulates aluminum resistance via restriction of aluminum uptake in rice · 2023

  26. The miR165/166–PHABULOSA module promotes thermotolerance by transcriptionally and posttranslationally regulating HSFA1 · 2023

    cited by 1 paper here

  27. SUPPRESSOR OF MAX2 LIKE 6, 7, and 8 Interact with DDB1 BINDING WD REPEAT DOMAIN HYPERSENSITIVE TO ABA DEFICIENT 1 to Regulate the Drought Tolerance and Target SUCROSE NONFERMENTING 1 RELATED PROTEIN KINASE 2.3 to Abscisic Acid Response in Arabidopsis · 2023

  28. RAS signalling genes can be used as host‐induced gene silencing targets to control fungal diseases caused by Sclerotinia sclerotiorum and Botrytis cinerea · 2023

  29. IRON MAN interacts with Cu‐DEFICIENCY INDUCED TRANSCRIPTION FACTOR 1 to maintain copper homeostasis · 2023

  30. Alternaria TeA toxin activates a chloroplast retrograde signaling pathway to facilitate JA-dependent pathogenicity · 2023

  31. The susceptibility factor Resistance To Phytophthora parasitica 1 negatively regulates Arabidopsis immunity by interacting with the cytochrome P450 protein CYP71B3 · 2025

Papers reporting a negative result or no effect 51

  1. The Arabidopsis thaliana SOS2 gene encodes a protein kinase that is required for salt tolerance · 2000

    cited by 1 paper here

  2. Opposing roles of phytochrome A and phytochrome B in early cryptochrome‐mediated growth inhibition · 2001

    cites 1 paper here

  3. Unexpected roles for cryptochrome 2 and phototropin revealed by high‐resolution analysis of blue light‐mediated hypocotyl growth inhibition · 2001

    cited by 1 paper here

  4. Genetic Analysis of Developmentally Regulated Resistance to Downy Mildew (Hyaloperonospora parasitica) in Arabidopsis thaliana · 2005

  5. The Arabidopsis Tetratricopeptide Repeat-Containing Protein TTL1 Is Required for Osmotic Stress Responses and Abscisic Acid Sensitivity · 2006

    cites 1 paper here

  6. A coumaroyl-ester-3-hydroxylase insertion mutant reveals the existence of nonredundant meta-hydroxylation pathways and essential roles for phenolic precursors in cell expansion and plant growth · 2006

  7. Regulation of Systemic Acquired Resistance by NPR1 and its Partners · 2007

  8. Dual Regulation Role of GH3.5 in Salicylic Acid and Auxin Signaling during Arabidopsis-Pseudomonas syringae Interaction · 2007

  9. Phosphatidic acid binds to and inhibits the activity of Arabidopsis CTR1 · 2007

  10. Overexpression of Arabidopsis MAP kinase kinase 7 leads to activation of plant basal and systemic acquired resistance · 2007

  11. A LysM Receptor-Like Kinase Plays a Critical Role in Chitin Signaling and Fungal Resistance in Arabidopsis · 2008

  12. Decrease in Manganese Superoxide Dismutase Leads to Reduced Root Growth and Affects Tricarboxylic Acid Cycle Flux and Mitochondrial Redox Homeostasis     · 2008

  13. Calcium‐dependent protein kinases regulate polarized tip growth in pollen tubes · 2009

    cited by 1 paper here

  14. The Rab GTPase RabA4d Regulates Pollen Tube Tip Growth inArabidopsis thaliana  · 2009

  15. BRCC36A is epistatic to BRCA1 in DNA crosslink repair and homologous recombination in Arabidopsis thaliana · 2010

  16. Salmonella enterica strains belonging to O serogroup 1,3,19 induce chlorosis and wilting of Arabidopsis thaliana leaves · 2011

  17. Light-harvesting chlorophyll a/b-binding proteins are required for stomatal response to abscisic acid in Arabidopsis · 2011

  18. The Arabidopsis Mediator Complex Subunit16 Positively Regulates Salicylate-Mediated Systemic Acquired Resistance and Jasmonate/Ethylene-Induced Defense Pathways · 2012

    cited by 1 paper here

  19. Analysis of the role of the pyruvate decarboxylase gene family in Arabidopsis thaliana under low‐oxygen conditions · 2013

    cited by 1 paper here

  20. Ca2+-Dependent Protein Kinase11 and 24 Modulate the Activity of the Inward Rectifying K+ Channels inArabidopsisPollen Tubes · 2013

    cites 1 paper here

  21. Phytochrome-induced SIG2 expression contributes to photoregulation of phytochrome signalling and photomorphogenesis in Arabidopsis thaliana · 2013

  22. Mechanismen der Genregulation bei der 'geprimten' Stressantwort in Arabidopsis thaliana · 2013

  23. MAN3 gene regulates cadmium tolerance through the glutathione‐dependent pathway in Arabidopsis thaliana · 2014

  24. A circadian oscillator in the fungus Botrytis cinerea regulates virulence when infecting Arabidopsis thaliana · 2015

  25. A Critical Role of Lyst-Interacting Protein5, a Positive Regulator of Multivesicular Body Biogenesis, in Plant Responses to Heat and Salt Stresses · 2015

  26. Reduction of phytate by down-regulation of Arabidopsis thaliana MIPS and IPK1 genes alters susceptibility to beet cyst nematodes · 2015

  27. MicroRNA844-Guided Downregulation of Cytidinephosphate Diacylglycerol Synthase3 (CDS3) mRNA Affects the Response of Arabidopsis thaliana to Bacteria and Fungi · 2015

  28. Investigating the Association between Flowering Time and Defense in the Arabidopsis thaliana-Fusarium oxysporum Interaction · 2015

  29. Mutation of the Glucosinolate Biosynthesis Enzyme Cytochrome P450 83A1 Monooxygenase Increases Camalexin Accumulation and Powdery Mildew Resistance · 2016

  30. The Transcription Factor NIN-LIKE PROTEIN7 Controls Border-Like Cell Release · 2016

  31. bHLH transcription factor bHLH115 regulates iron homeostasis in Arabidopsis thaliana · 2017

  32. EXO70C2 Is a Key Regulatory Factor for Optimal Tip Growth of Pollen · 2017

  33. A lectin receptor kinase as a potential sensor for extracellular nicotinamide adenine dinucleotide in Arabidopsis thaliana · 2017

    cites 1 paper here

  34. SNAIL1 is essential for female gametogenesis in Arabidopsis thaliana · 2017

  35. GENERAL CONTROL NONREPRESSIBLE4 Degrades 14-3-3 and the RIN4 Complex to Regulate Stomatal Aperture with Implications on Nonhost Disease Resistance and Drought Tolerance · 2017

  36. Genetic analysis of receptor-like protein SNC2-mediated plant resistance in Arabidopsis · 2018

  37. Arabidopsis thaliana legume lectin-like proteins at the interface between systemic acquired resistance and abiotic stress responses · 2018

  38. The Arabidopsis defensin gene AtPDF2.5 mediates cadmium tolerance and accumulation · 2019

  39. Mutation of HPR1 encoding a component of the THO/TREX complex reduces STOP1 accumulation and aluminium resistance in Arabidopsis thaliana · 2020

  40. Putrescine elicits ROS‐dependent activation of the salicylic acid pathway in Arabidopsis thaliana · 2020

  41. Coordination of microbe–host homeostasis by crosstalk with plant innate immunity · 2021

  42. UGT76B1, a promiscuous hub of small molecule-based immune signaling, glucosylates N-hydroxypipecolic acid, and balances plant immunity · 2021

    cites 1 paper herecited by 1 paper here

  43. The Influence of Singlet Oxygen and Loss of Function of Fatty Acid Desaturase 7 in the Chloroplast on Aphid Resistance in Arabidopsis thaliana · 2021

  44. Reduction of the canonical function of a glycolytic enzyme enolase triggers immune responses that further affect metabolism and growth in Arabidopsis · 2021

    cites 1 paper here

  45. Glyoxalase I activity affects Arabidopsis sensitivity to ammonium nutrition · 2022

  46. The flowering time regulator FLK controls pathogen defense in Arabidopsis thaliana · 2023

  47. The Verticillium dahliae Small Cysteine-Rich Protein VdSCP23 Manipulates Host Immunity · 2023

  48. The chloroplast‐localized casein kinase II α subunit, CPCK2, negatively regulates plant innate immunity through promoting S‐nitrosylation of SABP3 · 2024

  49. Arabidopsis WALL-ASSOCIATED KINASES are not required for oligogalacturonide-induced signaling and immunity · 2024

  50. Heat stress triggers enhanced nuclear localization of HYPONASTIC LEAVES 1 to regulate microRNA biogenesis and thermotolerance in plants · 2025

    cites 1 paper here

  51. PmeR, a TetR-like transcriptional regulator, is involved in both auxin signaling and virulence in the plant pathogen Pseudomonas syringae strain Pto DC3000 · 2025

    cites 1 paper here

A paper is on the positive side when any of its claims here is positive. Claims are grouped by organism, treatment and what was measured or targeted. Claims that compare genotypes are left out; a claim about lacking a nutrient counts the other way round in that nutrient’s question. “Results differ” marks a question where two model reviewers, reading both claims, accepted at least one pair of papers whose results differ.

loss of function on Arabidopsis thaliana (thale cress) against other targets

loss of function · disease on other organisms