Paper · 2020 · New Phytologist

Mutation of HPR1 encoding a component of the THO/TREX complex reduces STOP1 accumulation and aluminium resistance in Arabidopsis thaliana

Jinliang Guo; Yang Zhang; Huiling Gao; et al.

7
claims
14
verbatim quotes
47
citations
2
research areas
✓
Open access

Abstract

C2H2-type zinc finger transcription factor sensitive to proton rhizotoxicity 1 (STOP1) plays an essential role in aluminium (Al) resistance in Arabidopsis thaliana by controlling the expression of a set of Al-resistance genes, including the malate transporter-encoding gene A. thaliana aluminium activated malate transporter 1 (AtALMT1) that is critically required for Al resistance. STOP1 is suggested to be modulated by Al at post-transcriptional and/or post-translational levels. However, the underlying molecular mechanisms remain to be demonstrated. We carried out a forward genetic screen on an ethyl methanesulphonate mutagenized population, which contains the AtALMT1 promoter-driven luciferase reporter gene (pAtALMT1:LUC), and identified hyperrecombination protein 1 (HPR1), which encodes a subunit of the THO/TREX complex. We investigate the effect of hpr1 mutations on the expression of Al-resistance genes and Al resistance, and we also examined the regulatory role of HPR1 in nuclear messenger RNA (mRNA) and protein accumulation of STOP1 gene. Mutation of HPR1 reduces the expression of STOP1-regulated genes and the associated Al resistance. The hpr1 mutations increase STOP1 mRNA retention in the nucleus and consequently decrease STOP1 protein abundance. Mutation of regulation of AtALMT1 expression 1 (RAE1) that mediates STOP1 degradation in the hpr1 mutant background can partially rescue the deficient phenotypes of hpr1 mutants. Our results demonstrate that HPR1 modulates Al resistance partly through the regulation of nucleocytoplasmic STOP1 mRNA export.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

A forward genetic screen identified HPR1, encoding a THO/TREX subunit.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
hyperrecombination protein 1 (HPR1)e0
Outcome
encodes a subunit of the THO/TREX complexe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“identified hyperrecombination protein 1 (HPR1), which encodes a subunit of the THO/TREX complex”

✓ located verbatim in the source · abstract, characters 737–832 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 117–137 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

HPR1 mutation reduced STOP1-regulated gene expression.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
Mutation of HPR1e0
Gene
HPR1e0
Outcome
expression of STOP1-regulated genese0
Direction
reducese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Mutation of HPR1 reduces the expression of STOP1-regulated genes and the associated Al resistance.”

✓ located verbatim in the source · abstract, characters 1059–1157 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 117–137 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

HPR1 mutation reduced aluminium resistance.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
Mutation of HPR1e0
Gene
HPR1e0
Outcome
Al resistancee0
Direction
reducese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Mutation of HPR1 reduces the expression of STOP1-regulated genes and the associated Al resistance.”

✓ located verbatim in the source · abstract, characters 1059–1157 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 117–137 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

hpr1 mutations increased nuclear retention of STOP1 mRNA.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
hpr1 mutationse0
Gene
STOP1e0
Outcome
STOP1 mRNA retention in the nucleuse0
Direction
increasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The hpr1 mutations increase STOP1 mRNA retention in the nucleus and consequently decrease STOP1 protein abundance.”

✓ located verbatim in the source · abstract, characters 1158–1272 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 117–137 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

hpr1 mutations consequently decreased STOP1 protein abundance.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
hpr1 mutationse0
Gene
STOP1e0
Outcome
STOP1 protein abundancee0
Direction
decreasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The hpr1 mutations increase STOP1 mRNA retention in the nucleus and consequently decrease STOP1 protein abundance.”

✓ located verbatim in the source · abstract, characters 1158–1272 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 117–137 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

RAE1 mutation in hpr1 partially rescued deficient phenotypes.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
Mutation of regulation of AtALMT1 expression 1 (RAE1)e0
Gene
regulation of AtALMT1 expression 1 (RAE1)e0
Outcome
deficient phenotypese0
Direction
rescuee0
Qualifier
partiallye0
Comparator
hpr1 mutantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Mutation of regulation of AtALMT1 expression 1 (RAE1) that mediates STOP1 degradation in the hpr1 mutant background can partially rescue the deficient phenotypes of hpr1 mutants.”

✓ located verbatim in the source · abstract, characters 1273–1451 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 117–137 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

HPR1 partly modulates aluminium resistance through nucleocytoplasmic STOP1 mRNA export.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
HPR1e0
Outcome
Al resistancee0
Qualifier
partly through the regulation of nucleocytoplasmic STOP1 mRNA exporte0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Our results demonstrate that HPR1 modulates Al resistance partly through the regulation of nucleocytoplasmic STOP1 mRNA export.”

✓ located verbatim in the source · abstract, characters 1452–1579 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 117–137 · show in text ↑

loss of function · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

73 papers: 13 positive, 60 negative or no effect

59 papers in the same direction as this paper · 13 in the opposite direction

  1. positive
  2. positive
  3. positive

69 papers more in this group

See all 73 papers →

loss of function · molecular: metabolites · Arabidopsis thaliana (thale cress)Positive and negative results

76 papers: 16 positive, 60 negative or no effect

59 papers in the same direction as this paper · 16 in the opposite direction

  1. positive
  2. positive
  3. positive

72 papers more in this group

See all 76 papers →

loss of function · disease · Arabidopsis thaliana (thale cress)Positive and negative results

82 papers: 31 positive, 51 negative or no effect

50 papers in the same direction as this paper · 31 in the opposite direction

  1. positive
  2. positive
  3. positive

78 papers more in this group

See all 82 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.