Paper · 2014 · The Plant Cell

An Uncharacterized Apocarotenoid-Derived Signal Generated in ζ-Carotene Desaturase Mutants Regulates Leaf Development and the Expression of Chloroplast and Nuclear Genes inArabidopsis

Aida-Odette Avendaño-Vázquez; Elizabeth Cordoba; Ernesto Llamas; et al.

5
claims
10
verbatim quotes
181
citations
3
research areas
✓
Open access

Abstract

In addition to acting as photoprotective compounds, carotenoids also serve as precursors in the biosynthesis of several phytohormones and proposed regulatory signals. Here, we report a signaling process derived from carotenoids that regulates early chloroplast and leaf development. Biosynthesis of the signal depends on ζ-carotene desaturase activity encoded by the ζ-CAROTENE DESATURASE (ZDS)/CHLOROPLAST BIOGENESIS5 (CLB5) gene in Arabidopsis thaliana. Unlike other carotenoid-deficient plants, zds/clb5 mutant alleles display profound alterations in leaf morphology and cellular differentiation as well as altered expression of many plastid- and nucleus-encoded genes. The leaf developmental phenotypes and gene expression alterations of zds/clb5/spc1/pde181 plants are rescued by inhibitors or mutations of phytoene desaturase, demonstrating that phytofluene and/or ζ-carotene are substrates for an unidentified signaling molecule. Our work further demonstrates that this signal is an apocarotenoid whose synthesis requires the activity of the carotenoid cleavage dioxygenase CCD4.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 5

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

zds/clb5 mutant alleles show profound alterations in leaf morphology and cellular differentiation in Arabidopsis

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Material
zds/clb5 mutant allelese1
Outcome
leaf morphology and cellular differentiatione1
Qualifier
profound alterationse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“gene in Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 426–454 · show in text ↑
e1

“zds/clb5 mutant alleles display profound alterations in leaf morphology and cellular differentiation as well as altered expression of many plastid- and nucleus-encoded genes”

✓ located verbatim in the source · abstract, characters 498–671 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

zds/clb5 mutant alleles show altered expression of many plastid- and nucleus-encoded genes in Arabidopsis

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Material
zds/clb5 mutant allelese1
Outcome
expression of many plastid- and nucleus-encoded genese1
Qualifier
alterede1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“gene in Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 426–454 · show in text ↑
e1

“zds/clb5 mutant alleles display profound alterations in leaf morphology and cellular differentiation as well as altered expression of many plastid- and nucleus-encoded genes”

✓ located verbatim in the source · abstract, characters 498–671 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Inhibitors or mutations of phytoene desaturase rescue the leaf phenotypes and gene expression alterations of zds/clb5/spc1/pde181 plants

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
inhibitors or mutations of phytoene desaturasee2
Outcome
leaf developmental phenotypes and gene expression alterationse2
Direction
rescuede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“gene in Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 426–454 · show in text ↑
e2

“The leaf developmental phenotypes and gene expression alterations of zds/clb5/spc1/pde181 plants are rescued by inhibitors or mutations of phytoene desaturase”

✓ located verbatim in the source · abstract, characters 673–831 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

Phytofluene and/or ζ-carotene are substrates for an unidentified signaling molecule in Arabidopsis

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Compound
phytofluene and/or ζ-carotenee3
Outcome
substrates for an unidentified signaling moleculee3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“gene in Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 426–454 · show in text ↑
e3

“demonstrating that phytofluene and/or ζ-carotene are substrates for an unidentified signaling molecule”

✓ located verbatim in the source · abstract, characters 833–935 · show in text ↑
Mechanismobservedoriginal resultbasis n/a

Claim · model-written summary

The zds-derived signal is an apocarotenoid whose synthesis requires CCD4 activity in Arabidopsis

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Gene
CCD4e4
Compound
apocarotenoide4
Outcome
synthesise4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“gene in Arabidopsis thaliana”

✓ located verbatim in the source · abstract, characters 426–454 · show in text ↑
e4

“this signal is an apocarotenoid whose synthesis requires the activity of the carotenoid cleavage dioxygenase CCD4”

✓ located verbatim in the source · abstract, characters 972–1085 · show in text ↑

loss of function · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

73 papers: 13 positive, 60 negative or no effect

12 papers in the same direction as this paper · 60 in the opposite direction

  1. negative
  2. negative
  3. negative

69 papers more in this group

See all 73 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.