Paper · 2004 · FEBS Letters

FRU (BHLH029) is required for induction of iron mobilization genes in Arabidopsis thaliana

Marc Jakoby; Hong-Yu Wang; Wim Reidt; et al.

5
claims
10
verbatim quotes
357
citations
2
research areas
—
Not open access

Abstract

Iron mobilization responses are induced by low iron supply at transcriptional level. In tomato, the basic helix-loop-helix gene FER is required for induction of iron mobilization. Using molecular-genetic techniques, we analyzed the function of BHLH029, named FRU (FER-like regulator of iron uptake), the Arabidopsis thaliana homolog of the tomato FER gene. The FRU gene was mainly expressed in roots in a cell-specific pattern and induced by iron deficiency. FRU mutant plants were chlorotic, and the FRU gene was found necessary for induction of the essential iron mobilization genes FRO2 (ferric chelate reductase gene) and IRT1 (iron-regulated transporter gene). Overexpression of FRU resulted in an increase of iron mobilization responses at low iron supply. Thus, the FRU gene is a mediator in induction of iron mobilization responses in Arabidopsis, indicating that regulation of iron uptake is conserved in dicot species.

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Claims 5

Observationobservedoriginal resultmeasured

Claim · model-written summary

The FRU gene is expressed mainly in roots of Arabidopsis thaliana in a cell-specific pattern.

Taxon
Arabidopsis thalianaArabidopsis thalianae4
Organ / stage
rootse1
Gene
FRUe1
Outcome
expressede1
Qualifier
in a cell-specific patterne1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e4

“the Arabidopsis thaliana homolog of the tomato FER gene”

✓ located verbatim in the source · abstract, characters 300–355 · show in text ↑
e1

“The FRU gene was mainly expressed in roots in a cell-specific pattern and induced by iron deficiency”

✓ located verbatim in the source · abstract, characters 357–457 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Iron deficiency induces the FRU gene in Arabidopsis thaliana.

Taxon
Arabidopsis thalianaArabidopsis thalianae4
Treatment
iron deficiencye1
Gene
FRUe1
Outcome
FRU genee1
Direction
inducede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e4

“the Arabidopsis thaliana homolog of the tomato FER gene”

✓ located verbatim in the source · abstract, characters 300–355 · show in text ↑
e1

“The FRU gene was mainly expressed in roots in a cell-specific pattern and induced by iron deficiency”

✓ located verbatim in the source · abstract, characters 357–457 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

FRU mutant plants of Arabidopsis thaliana were chlorotic.

Taxon
Arabidopsis thalianaArabidopsis thalianae4
Material
FRU mutante2
Outcome
chlorotice2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e4

“the Arabidopsis thaliana homolog of the tomato FER gene”

✓ located verbatim in the source · abstract, characters 300–355 · show in text ↑
e2

“FRU mutant plants were chlorotic, and the FRU gene was found necessary for induction of the essential iron mobilization genes FRO2 (ferric chelate reductase gene) and IRT1 (iron-regulated transporter gene)”

✓ located verbatim in the source · abstract, characters 459–664 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The FRU gene is necessary for induction of the FRO2 and IRT1 iron mobilization genes.

Taxon
Arabidopsis thalianaArabidopsis thalianae4
Treatment
FRU mutante2
Gene
FRO2 (ferric chelate reductase gene) and IRT1e2
Outcome
induction of the essential iron mobilization genese2
Direction
increaseinferrede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e4

“the Arabidopsis thaliana homolog of the tomato FER gene”

✓ located verbatim in the source · abstract, characters 300–355 · show in text ↑
e2

“FRU mutant plants were chlorotic, and the FRU gene was found necessary for induction of the essential iron mobilization genes FRO2 (ferric chelate reductase gene) and IRT1 (iron-regulated transporter gene)”

✓ located verbatim in the source · abstract, characters 459–664 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Overexpression of FRU increased iron mobilization responses at low iron supply.

Taxon
Arabidopsis thalianaArabidopsis thalianae4
Treatment
Overexpression of FRUe3
Gene
FRUe3
Outcome
iron mobilization responsese3
Direction
increasee3
Qualifier
at low iron supplye3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e4

“the Arabidopsis thaliana homolog of the tomato FER gene”

✓ located verbatim in the source · abstract, characters 300–355 · show in text ↑
e3

“Overexpression of FRU resulted in an increase of iron mobilization responses at low iron supply”

✓ located verbatim in the source · abstract, characters 666–761 · show in text ↑

iron atom · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

10 papers: 3 positive, 7 negative or no effect

6 papers in the same direction as this paper · 3 in the opposite direction

This paper is about lacking the nutrient, so it counts the other way round here.

  1. positive
  2. positive
  3. positive

6 papers more in this group

See all 10 papers →

loss of function · molecular: expression · Arabidopsis thaliana (thale cress)Positive and negative results

73 papers: 13 positive, 60 negative or no effect

12 papers in the same direction as this paper · 60 in the opposite direction

  1. negative
  2. negative
  3. negative

69 papers more in this group

See all 73 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.