Paper · 2017 · PLoS ONE

Formation of friable embryogenic callus in cassava is enhanced under conditions of reduced nitrate, potassium and phosphate

Yoshinori Utsumi; Chikako Utsumi; Maho Tanaka; et al.

4
claims
9
verbatim quotes
23
citations
3
research areas
✓
Open access · cc-by

Abstract

Agrobacterium-mediated transformation is an important research tool for the genetic improvement of cassava. The induction of friable embryogenic callus (FEC) is considered as a key step in cassava transformation. In the present study, the media composition was optimized for enhancing the FEC induction, and the effect of the optimized medium on gene expression was evaluated. In relative comparison to MS medium, results demonstrated that using a medium with reducing nutrition (a 10-fold less concentration of nitrogen, potassium, and phosphate), the increased amount of vitamin B1 (10 mg/L) and the use of picrolam led to reprogram non-FEC to FEC. Gene expression analyses revealed that FEC on modified media increased the expression of genes related to the regulation of polysaccharide biosynthesis and breakdown of cell wall components in comparison to FEC on normal CIM media, whereas the gene expression associated with energy flux was not dramatically altered. It is hypothesized that we reprogram non-FEC to FEC under low nitrogen, potassium and phosphate and high vitamin B1. These findings were more effective in inducing FEC formation than the previous protocol. It might contribute to development of an efficient transformation strategy in cassava.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 4

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Reduced nutrients, increased vitamin B1 and picrolam induced conversion of non-FEC to FEC.

Treatment
a medium with reducing nutrition (a 10-fold less concentration of nitrogen, potassium, and phosphate), the increased amount of vitamin B1 (10 mg/L) and the use of picrolame0
Outcome
reprogram non-FEC to FECe0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Manihot esculenta
Manihot esculenta · Taxon葉子 · CC0 · iNaturalist ↗

Verbatim

e0

“using a medium with reducing nutrition (a 10-fold less concentration of nitrogen, potassium, and phosphate), the increased amount of vitamin B1 (10 mg/L) and the use of picrolam led to reprogram non-FEC to FEC.”

✓ located verbatim in the source · abstract, characters 440–650 · show in text ↑
t0

“cassava”

✓ located verbatim in the source · title, characters 43–50 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

FEC on modified media showed increased expression of cell wall polysaccharide metabolism genes relative to normal CIM.

Treatment
modified mediae0
Outcome
expression of genes related to the regulation of polysaccharide biosynthesis and breakdown of cell wall componentse0
Direction
increasede0
Comparator
normal CIM mediae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Manihot esculenta
Manihot esculenta · Taxon葉子 · CC0 · iNaturalist ↗

Verbatim

e0

“FEC on modified media increased the expression of genes related to the regulation of polysaccharide biosynthesis and breakdown of cell wall components in comparison to FEC on normal CIM media”

✓ located verbatim in the source · abstract, characters 690–881 · show in text ↑
t0

“cassava”

✓ located verbatim in the source · title, characters 43–50 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Expression of energy flux genes was not dramatically altered on modified media.

Treatment
modified mediae1
Outcome
gene expression associated with energy fluxe0
Direction
not dramatically alterede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Manihot esculenta
Manihot esculenta · Taxon葉子 · CC0 · iNaturalist ↗

Verbatim

e0

“the gene expression associated with energy flux was not dramatically altered.”

✓ located verbatim in the source · abstract, characters 891–968 · show in text ↑
t0

“cassava”

✓ located verbatim in the source · title, characters 43–50 · show in text ↑
e1

“modified media”

✓ located verbatim in the source · abstract, characters 697–711 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

The modified medium induced FEC formation more effectively than the previous protocol.

Outcome
inducing FEC formatione0
Direction
more effectivee0
Comparator
the previous protocole0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Manihot esculenta
Manihot esculenta · Taxon葉子 · CC0 · iNaturalist ↗

Verbatim

e0

“These findings were more effective in inducing FEC formation than the previous protocol.”

✓ located verbatim in the source · abstract, characters 1086–1174 · show in text ↑
t0

“cassava”

✓ located verbatim in the source · title, characters 43–50 · show in text ↑

in vitro · molecular: expression · Manihot esculenta (cassava)Positive and negative results

4 papers: 2 positive, 2 negative or no effect

1 paper in the same direction as this paper · 2 in the opposite direction

  1. positive
  2. positive
  3. negative
See all 4 papers →

phosphorus · growth · Manihot esculenta (cassava)Positive and negative results

5 papers: 4 positive, 1 negative or no effect

3 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

1 paper more in this group

See all 5 papers →

potassium · growth · Manihot esculenta (cassava)Positive and negative results

5 papers: 4 positive, 1 negative or no effect

3 papers in the same direction as this paper · 1 in the opposite direction

  1. no effect
  2. positive
  3. positive

1 paper more in this group

See all 5 papers →

nitrogen · growth · Manihot esculenta (cassava)Positive and negative results

13 papers: 12 positive, 1 negative or no effect

11 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

9 papers more in this group

See all 13 papers →

in vitro · growth · Manihot esculenta (cassava)Positive and negative results

35 papers: 30 positive, 5 negative or no effect

29 papers in the same direction as this paper · 5 in the opposite direction

  1. negative
  2. no effect
  3. negative

31 papers more in this group

See all 35 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.