Paper · 2017 · New Phytologist

Target of rapamycin signaling orchestrates growth–defense trade‐offs in plants

David De Vleesschauwer; Osvaldo Filipe; Gena Hoffman; et al.

7
claims
16
verbatim quotes
129
citations
4
research areas
✓
Open access

Abstract

Plant defense to microbial pathogens is often accompanied by significant growth inhibition. How plants merge immune system function with normal growth and development is still poorly understood. Here, we investigated the role of target of rapamycin (TOR), an evolutionary conserved serine/threonine kinase, in the plant defense response. We used rice as a model system and applied a combination of chemical, genetic, genomic and cell-based analyses. We demonstrate that ectopic expression of TOR and Raptor (regulatory-associated protein of mTOR), a protein previously demonstrated to interact with TOR in Arabidopsis, positively regulates growth and development in rice. Transcriptome analysis of rice cells treated with the TOR-specific inhibitor rapamycin revealed that TOR not only dictates transcriptional reprogramming of extensive gene sets involved in central and secondary metabolism, cell cycle and transcription, but also suppresses many defense-related genes. TOR overexpression lines displayed increased susceptibility to both bacterial and fungal pathogens, whereas plants with reduced TOR signaling displayed enhanced resistance. Finally, we found that TOR antagonizes the action of the classic defense hormones salicylic acid and jasmonic acid. Together, these results indicate that TOR acts as a molecular switch for the activation of cell proliferation and plant growth at the expense of cellular immunity.

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Claims 7

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ectopic expression of TOR and Raptor positively regulates growth and development in rice.

Treatment
ectopic expression of TOR and Raptore1
Gene
TOR and Raptore1
Outcome
growth and developmente1
Direction
increaseinferrede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“We used rice as a model system”

✓ located verbatim in the source · abstract, characters 338–368 · show in text ↑
e1

“ectopic expression of TOR and Raptor (regulatory-associated protein of mTOR), a protein previously demonstrated to interact with TOR in Arabidopsis, positively regulates growth and development in rice”

✓ located verbatim in the source · abstract, characters 470–670 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Rapamycin-treated rice cells showed transcriptional reprogramming of extensive gene sets in central and secondary metabolism, cell cycle and transcription, dictated by TOR.

Treatment
rapamycine2
Outcome
transcriptional reprogramming of extensive gene setse2

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“We used rice as a model system”

✓ located verbatim in the source · abstract, characters 338–368 · show in text ↑
e2

“Transcriptome analysis of rice cells treated with the TOR-specific inhibitor rapamycin revealed that TOR not only dictates transcriptional reprogramming of extensive gene sets involved in central and secondary metabolism, cell cycle and transcription”

✓ located verbatim in the source · abstract, characters 672–922 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

TOR suppresses many defense-related genes in rice.

Gene
TORe2
Outcome
defense-related genese3
Direction
suppressese3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“We used rice as a model system”

✓ located verbatim in the source · abstract, characters 338–368 · show in text ↑
e2

“Transcriptome analysis of rice cells treated with the TOR-specific inhibitor rapamycin revealed that TOR not only dictates transcriptional reprogramming of extensive gene sets involved in central and secondary metabolism, cell cycle and transcription”

✓ located verbatim in the source · abstract, characters 672–922 · show in text ↑
e3

“but also suppresses many defense-related genes”

✓ located verbatim in the source · abstract, characters 924–970 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

TOR overexpression lines showed increased susceptibility to bacterial and fungal pathogens.

Material
TOR overexpression linese4
Treatment
TOR overexpressione4
Interactor
bacterial and fungal pathogense4pathogen
Outcome
susceptibilitye4
Direction
increasede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“We used rice as a model system”

✓ located verbatim in the source · abstract, characters 338–368 · show in text ↑
e4

“TOR overexpression lines displayed increased susceptibility to both bacterial and fungal pathogens”

✓ located verbatim in the source · abstract, characters 972–1070 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Plants with reduced TOR signaling showed enhanced resistance to bacterial and fungal pathogens.

Treatment
reduced TOR signalinge5
Interactor
bacterial and fungal pathogense4pathogen
Outcome
resistancee5
Direction
enhancede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“We used rice as a model system”

✓ located verbatim in the source · abstract, characters 338–368 · show in text ↑
e4

“TOR overexpression lines displayed increased susceptibility to both bacterial and fungal pathogens”

✓ located verbatim in the source · abstract, characters 972–1070 · show in text ↑
e5

“whereas plants with reduced TOR signaling displayed enhanced resistance”

✓ located verbatim in the source · abstract, characters 1072–1143 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

TOR antagonizes the action of the classic defense hormones salicylic acid and jasmonic acid.

Gene
TORe6
Compound
salicylic acid and jasmonic acide6
Outcome
action of the classic defense hormonese6
Direction
decreaseinferrede6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“We used rice as a model system”

✓ located verbatim in the source · abstract, characters 338–368 · show in text ↑
e6

“TOR antagonizes the action of the classic defense hormones salicylic acid and jasmonic acid”

✓ located verbatim in the source · abstract, characters 1168–1259 · show in text ↑
Mechanismauthor interpretationoriginal resultmixedbasis n/a

Claim · model-written summary

TOR acts as a molecular switch that activates cell proliferation and plant growth at the expense of cellular immunity in rice.

Gene
TORe7
Outcome
activation of cell proliferation and plant growthe7
Qualifier
at the expense of cellular immunitye7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“We used rice as a model system”

✓ located verbatim in the source · abstract, characters 338–368 · show in text ↑
e7

“TOR acts as a molecular switch for the activation of cell proliferation and plant growth at the expense of cellular immunity”

✓ located verbatim in the source · abstract, characters 1299–1423 · show in text ↑

sirolimus · growth · Oryza sativa (rice)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

overexpression · growth · Oryza sativa (rice)Positive and negative results

20 papers: 10 positive, 10 negative or no effect

9 papers in the same direction as this paper · 10 in the opposite direction

  1. positive
  2. negative
  3. no effect

16 papers more in this group

See all 20 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.