Paper · 2018 · Forest Pathology

Transcriptome changes and its effect on physiological and metabolic processes in tea plant during mechanical damage

X. Li; Y. Lin; S. Zhao; et al.

8
claims
15
verbatim quotes
18
citations
4
research areas
—
Not open access

Abstract

Summary Mechanical damage affects tea plant growth and the quality of tea‐leaf products. However, data on the wound response of tea leaves at the transcriptome level remain scarce. In this study, the transcriptome of wound‐induced tea leaves was analysed by RNA ‐Seq and some of their secondary metabolites were determined using high‐performance liquid chromatography ( HPLC ) technology. The results showed that 129610 non‐redundant transcripts and 60361 unigenes were obtained, of which 100834 transcripts (77.80% of all transcripts) were annotated by sequence similarity searching against public databases and 28776 transcripts could be potentially new genes or novel transcripts from selective splicing. A total of 19214 differentially expressed transcripts ( DET s) were selected from the data set. DET functions involved various physiological and molecular biological processes in tea plant including various transcripts encoding protease inhibitors ( PI s), pathogenesis‐related proteins ( PR s) and enzymes related to catechin, caffeine and terpenoid metabolic pathways. Moreover, the contents of some polyphenols and caffeine were also validated in tea leaves after an increase in wounding. The transcriptome analysis revealed a reprogramming process in tea plants during wounding that involved various physiological and molecular biological processes, which can increase the resistance of plants against biotic and abiotic stress and affect the quality of tea‐leaf products. Our results not only provide systematic insight into the defence responses in tea plants during mechanical damage, but also are beneficial for the scientific cultivation of tea.

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Claims 8

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The tea leaf transcriptome yielded 129610 non-redundant transcripts and 60361 unigenes.

Taxon
tea plantt0
Outcome
non‐redundant transcriptse0
Value
129610e0
Qualifier
60361 unigenese0

Verbatim

e0

“129610 non‐redundant transcripts and 60361 unigenes were obtained”

✓ located verbatim in the source · abstract, characters 413–478 · show in text ↑
t0

“tea plant”

✓ located verbatim in the source · title, characters 81–90 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Sequence similarity annotated 100834 tea transcripts, 77.80% of all transcripts.

Taxon
tea plantt0
Outcome
transcriptse0
Value
100834 transcripts (77.80% of all transcripts)e0

Verbatim

e0

“100834 transcripts (77.80% of all transcripts) were annotated by sequence similarity searching against public databases”

✓ located verbatim in the source · abstract, characters 489–608 · show in text ↑
t0

“tea plant”

✓ located verbatim in the source · title, characters 81–90 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

A further 28776 tea transcripts could be new genes or alternative splice transcripts.

Taxon
tea plantt0
Outcome
potentially new genes or novel transcripts from selective splicinge0
Value
28776 transcriptse0

Verbatim

e0

“28776 transcripts could be potentially new genes or novel transcripts from selective splicing”

✓ located verbatim in the source · abstract, characters 613–706 · show in text ↑
t0

“tea plant”

✓ located verbatim in the source · title, characters 81–90 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The tea transcriptome dataset contained 19214 differentially expressed transcripts.

Taxon
tea plantt0
Outcome
differentially expressed transcriptse0
Value
19214e0

Verbatim

e0

“A total of 19214 differentially expressed transcripts ( DET s) were selected from the data set”

✓ located verbatim in the source · abstract, characters 708–802 · show in text ↑
t0

“tea plant”

✓ located verbatim in the source · title, characters 81–90 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Wound-responsive tea transcripts included protease inhibitors and pathogenesis-related proteins.

Taxon
tea plantt0
Treatment
mechanical damaget0
Outcome
transcripts encoding protease inhibitors ( PI s), pathogenesis‐related proteins ( PR s)e0

Verbatim

e0

“various transcripts encoding protease inhibitors ( PI s), pathogenesis‐related proteins ( PR s) and enzymes related to catechin, caffeine and terpenoid metabolic pathways”

✓ located verbatim in the source · abstract, characters 907–1077 · show in text ↑
t0

“tea plant during mechanical damage”

✓ located verbatim in the source · title, characters 81–115 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Wound-responsive tea transcripts included enzymes of catechin, caffeine, and terpenoid pathways.

Taxon
tea plantt0
Outcome
enzymes related to catechin, caffeine and terpenoid metabolic pathwayse0

Verbatim

e0

“enzymes related to catechin, caffeine and terpenoid metabolic pathways”

✓ located verbatim in the source · abstract, characters 1007–1077 · show in text ↑
t0

“tea plant”

✓ located verbatim in the source · title, characters 81–90 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

The contents of some tea leaf polyphenols and caffeine changed with increased wounding.

Taxon
tea plantt0
Organ / stage
tea leavese0
Treatment
increase in woundinge0
Outcome
contents of some polyphenols and caffeinee0

Not reportedDirection

Verbatim

e0

“the contents of some polyphenols and caffeine were also validated in tea leaves after an increase in wounding”

✓ located verbatim in the source · abstract, characters 1089–1198 · show in text ↑
t0

“tea plant”

✓ located verbatim in the source · title, characters 81–90 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Transcriptome analysis indicated reprogramming of tea physiology and molecular processes during wounding.

Taxon
tea plantse0
Treatment
woundinge0
Outcome
reprogramming processe0

Verbatim

e0

“The transcriptome analysis revealed a reprogramming process in tea plants during wounding that involved various physiological and molecular biological processes”

✓ located verbatim in the source · abstract, characters 1200–1360 · show in text ↑