Paper · 2020 · Journal of Basic Microbiology

Simple methods to remove microbes from leaf surfaces

J. Paola Saldierna Guzmán; Kennedy Nguyen; Stephen C. Hart

5
claims
9
verbatim quotes
30
citations
3
research areas
✓
Open access

Abstract

Endophytes have been defined as microorganisms living inside plant tissues without causing negative effects on their hosts. Endophytic microbes have been extensively studied for their plant growth-promoting traits. However, analyses of endophytes require complete removal of epiphytic microorganisms. We found that the established tests to evaluate surface sterility, polymerase chain reaction, and leaf imprints, are unreliable. Therefore, we used scanning electron microscopy (SEM) as an additional assessment of epiphyte removal. We used a diverse suite of sterilization protocols to remove epiphytic microorganisms from the leaves of a gymnosperm and an angiosperm tree to test the influence of leaf morphology on the efficacy of these methods. Additionally, leaf tissue damage was also evaluated by SEM, as damaging the leaves might have an impact on endophytes and could lead to inaccurate assessment of endophytic communities. Our study indicates, that complete removal of the leaf cuticle by the sterilization technique assures loss of epiphytic microbes, and that leaves of different tree species may require different sterilization protocols. Furthermore, our study demonstrates the importance of choosing the appropriate sterilization protocol to prevent erroneous interpretation of host-endophyte interactions. Moreover, it shows the utility of SEM for evaluating the effectiveness of surface sterilization methods and their impact on leaf tissue integrity.

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Claims 5

Method / resourceobservedoriginal resultnegativemeasured

Claim · model-written summary

PCR tests for leaf surface sterility were unreliable.

Taxon
a gymnosperm and an angiosperm treee1
Outcome
polymerase chain reactione0
Direction
unreliablee0

Not reportedComparatorValue

Verbatim

e0

“the established tests to evaluate surface sterility, polymerase chain reaction, and leaf imprints, are unreliable”

✓ located verbatim in the source · abstract, characters 315–428 · show in text ↑
e1

“leaves of a gymnosperm and an angiosperm tree”

✓ located verbatim in the source · abstract, characters 628–673 · show in text ↑
Method / resourceobservedoriginal resultnegativemeasured

Claim · model-written summary

Leaf imprint tests for surface sterility were unreliable.

Taxon
a gymnosperm and an angiosperm treee1
Outcome
leaf imprintse0
Direction
unreliablee0

Not reportedComparatorValue

Verbatim

e0

“the established tests to evaluate surface sterility, polymerase chain reaction, and leaf imprints, are unreliable”

✓ located verbatim in the source · abstract, characters 315–428 · show in text ↑
e1

“leaves of a gymnosperm and an angiosperm tree”

✓ located verbatim in the source · abstract, characters 628–673 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Complete cuticle removal by sterilization assured loss of epiphytic microbes.

Taxon
a gymnosperm and an angiosperm treee1
Treatment
complete removal of the leaf cuticle by the sterilization techniquee0
Interactor
epiphytic microbese0other
Outcome
loss of epiphytic microbese0
Direction
losse0

Not reportedComparator

Verbatim

e0

“complete removal of the leaf cuticle by the sterilization technique assures loss of epiphytic microbes”

✓ located verbatim in the source · abstract, characters 960–1062 · show in text ↑
e1

“leaves of a gymnosperm and an angiosperm tree”

✓ located verbatim in the source · abstract, characters 628–673 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

Different tree species may require different leaf sterilization protocols.

Taxon
tree speciese0
Outcome
different sterilization protocolse0

Verbatim

e0

“leaves of different tree species may require different sterilization protocols”

✓ located verbatim in the source · abstract, characters 1073–1151 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

SEM was useful for evaluating surface sterilization effectiveness and leaf tissue integrity.

Taxon
a gymnosperm and an angiosperm treee1
Outcome
effectiveness of surface sterilization methods and their impact on leaf tissue integritye0

Not reportedComparatorValue

Verbatim

e0

“utility of SEM for evaluating the effectiveness of surface sterilization methods and their impact on leaf tissue integrity”

✓ located verbatim in the source · abstract, characters 1346–1468 · show in text ↑
e1

“leaves of a gymnosperm and an angiosperm tree”

✓ located verbatim in the source · abstract, characters 628–673 · show in text ↑