Paper · 2020 · PLoS ONE

Genetic interactions regulating seed phytate and oligosaccharides in soybean (Glycine max L.)

Neelam R. Redekar; Natasha M. Glover; Ruslan M. Biyashev; et al.

7
claims
14
verbatim quotes
13
citations
2
research areas
✓
Open access · cc-by

Abstract

Two low-phytate soybean (Glycine max (L.) Merr.) mutant lines- V99-5089 (mips mutation on chromosome 11) and CX-1834 (mrp-l and mrp-n mutations on chromosomes 19 and 3, respectively) have proven to be valuable resources for breeding of low-phytate, high-sucrose, and low-raffinosaccharide soybeans, traits that are highly desirable from a nutritional and environmental standpoint. A recombinant inbred population derived from the cross CX1834 x V99-5089 provides an opportunity to study the effect of different combinations of these three mutations on soybean phytate and oligosaccharides levels. Of the 173 recombinant inbred lines tested, 163 lines were homozygous for various combinations of MIPS and two MRP loci alleles. These individuals were grouped into eight genotypic classes based on the combination of SNP alleles at the three mutant loci. The two genotypic classes that were homozygous mrp-l/mrp-n and either homozygous wild-type or mutant at the mips locus (MIPS/mrp-l/mrp-n or mips/mrp-l/mrp-n) displayed relatively similar ~55% reductions in seed phytate, 6.94 mg g -1 and 6.70 mg g-1 respectively, as compared with 15.2 mg g-1 in the wild-type MIPS/MRP-L/MRP-N seed. Therefore, in the presence of the double mutant mrp-l/mrp-n, the mips mutation did not cause a substantially greater decrease in seed phytate level. However, the nutritionally-desirable high-sucrose/low-stachyose/low-raffinose seed phenotype originally observed in soybeans homozygous for the mips allele was reversed in the presence of mrp-l/mrp-n mutations: homozygous mips/mrp-l/mrp-n seed displayed low-sucrose (7.70%), high-stachyose (4.18%), and the highest observed raffinose (0.94%) contents per gram of dry seed. Perhaps the block in phytic acid transport from its cytoplasmic synthesis site to its storage site, conditioned by mrp-l/mrp-n, alters myo-inositol flux in mips seeds in a way that restores to wild-type levels the mips conditioned reductions in raffinosaccharides. Overall this study determined the combinatorial effects of three low phytic acid causing mutations on regulation of seed phytate and oligosaccharides in soybean.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 7

Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Homozygous mrp-l/mrp-n seed with wild-type MIPS showed about 55% lower seed phytate (6.94 mg g-1) than wild-type MIPS/MRP-L/MRP-N seed.

Taxon
soybeanGlycine maxt0
Material
MIPS/mrp-l/mrp-ne0
Outcome
seed phytatee0
Direction
reductionse0
Value
~55%e0
Qualifier
6.94 mg g -1e0
Comparator
wild-type MIPS/MRP-L/MRP-N seede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“in soybean”

✓ located verbatim in the source · title, characters 66–76 · show in text ↑
e0

“homozygous wild-type or mutant at the mips locus (MIPS/mrp-l/mrp-n or mips/mrp-l/mrp-n) displayed relatively similar ~55% reductions in seed phytate, 6.94 mg g -1 and 6.70 mg g-1 respectively, as compared with 15.2 mg g-1 in the wild-type MIPS/MRP-L/MRP-N seed”

✓ located verbatim in the source · abstract, characters 922–1182 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Homozygous mips/mrp-l/mrp-n seed showed about 55% lower seed phytate (6.70 mg g-1) than wild-type MIPS/MRP-L/MRP-N seed.

Taxon
soybeanGlycine maxt0
Material
mips/mrp-l/mrp-ne0
Outcome
seed phytatee0
Direction
reductionse0
Value
~55%e0
Qualifier
6.70 mg g-1e0
Comparator
wild-type MIPS/MRP-L/MRP-N seede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“in soybean”

✓ located verbatim in the source · title, characters 66–76 · show in text ↑
e0

“homozygous wild-type or mutant at the mips locus (MIPS/mrp-l/mrp-n or mips/mrp-l/mrp-n) displayed relatively similar ~55% reductions in seed phytate, 6.94 mg g -1 and 6.70 mg g-1 respectively, as compared with 15.2 mg g-1 in the wild-type MIPS/MRP-L/MRP-N seed”

✓ located verbatim in the source · abstract, characters 922–1182 · show in text ↑
Associationobservedoriginal resultno effectmeasured

Claim · model-written summary

In the presence of the double mutant mrp-l/mrp-n, the mips mutation did not cause a substantially greater decrease in seed phytate level.

Taxon
soybeanGlycine maxt0
Treatment
mips mutatione1
Outcome
seed phytate levele1
Direction
substantially greater decreasee1
Qualifier
in the presence of the double mutant mrp-l/mrp-ne1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“in soybean”

✓ located verbatim in the source · title, characters 66–76 · show in text ↑
e1

“in the presence of the double mutant mrp-l/mrp-n, the mips mutation did not cause a substantially greater decrease in seed phytate level”

✓ located verbatim in the source · abstract, characters 1195–1331 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

The high-sucrose/low-stachyose/low-raffinose seed phenotype of mips homozygous soybean was reversed in the presence of mrp-l/mrp-n mutations.

Taxon
soybeanGlycine maxt0
Treatment
mrp-l/mrp-n mutationse2
Outcome
high-sucrose/low-stachyose/low-raffinose seed phenotypee2
Direction
reversede2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“in soybean”

✓ located verbatim in the source · title, characters 66–76 · show in text ↑
e2

“the nutritionally-desirable high-sucrose/low-stachyose/low-raffinose seed phenotype originally observed in soybeans homozygous for the mips allele was reversed in the presence of mrp-l/mrp-n mutations”

✓ located verbatim in the source · abstract, characters 1342–1542 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Seed of homozygous mips/mrp-l/mrp-n soybean had low sucrose (7.70%).

Taxon
soybeanGlycine maxt0
Material
homozygous mips/mrp-l/mrp-ne3
Outcome
sucrosee3
Direction
low-sucrosee3
Value
7.70%e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“in soybean”

✓ located verbatim in the source · title, characters 66–76 · show in text ↑
e3

“homozygous mips/mrp-l/mrp-n seed displayed low-sucrose (7.70%), high-stachyose (4.18%), and the highest observed raffinose (0.94%) contents per gram of dry seed”

✓ located verbatim in the source · abstract, characters 1544–1704 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Seed of homozygous mips/mrp-l/mrp-n soybean had high stachyose (4.18%).

Taxon
soybeanGlycine maxt0
Material
homozygous mips/mrp-l/mrp-ne3
Outcome
stachyosee3
Direction
high-stachyosee3
Value
4.18%e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“in soybean”

✓ located verbatim in the source · title, characters 66–76 · show in text ↑
e3

“homozygous mips/mrp-l/mrp-n seed displayed low-sucrose (7.70%), high-stachyose (4.18%), and the highest observed raffinose (0.94%) contents per gram of dry seed”

✓ located verbatim in the source · abstract, characters 1544–1704 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Seed of homozygous mips/mrp-l/mrp-n soybean had the highest observed raffinose content (0.94%).

Taxon
soybeanGlycine maxt0
Material
homozygous mips/mrp-l/mrp-ne3
Outcome
raffinosee3
Direction
higheste3
Value
0.94%e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

t0

“in soybean”

✓ located verbatim in the source · title, characters 66–76 · show in text ↑
e3

“homozygous mips/mrp-l/mrp-n seed displayed low-sucrose (7.70%), high-stachyose (4.18%), and the highest observed raffinose (0.94%) contents per gram of dry seed”

✓ located verbatim in the source · abstract, characters 1544–1704 · show in text ↑