Paper · 2020 · International Journal of Molecular Sciences

The Biocontrol Root-Oomycete, Pythium Oligandrum, Triggers Grapevine Resistance and Shifts in the Transcriptome of the Trunk Pathogenic Fungus, Phaeomoniella Chlamydospora

Amira Yacoub; Noel Magnin; Jonathan Gerbore; et al.

7
claims
9
verbatim quotes
24
citations
3
research areas
✓
Open access · cc-by

Abstract

The worldwide increase in grapevine trunk diseases, mainly esca, represents a major threat for vineyard sustainability. Biocontrol of a pioneer fungus of esca, Phaeomoniella chlamydospora, was investigated here by deciphering the tripartite interaction between this trunk-esca pathogen, grapevine and the biocontrol-oomycete, Pythium oligandrum. When P. oligandrum colonizes grapevine roots, it was observed that the wood necroses caused by P. chlamydospora were significantly reduced. Transcriptomic analyses of plant and fungus responses were performed to determine the molecular events occurring, with the aim to relate P.chlamydospora degradation of wood to gene expression modulation. Following P. oligandrum-root colonization, major transcriptomic changes occurred both, in the grapevine-defense system and in the P. chlamydospore-virulence factors. Grapevine-defense was enhanced in response to P. chlamydospora attacks, with P. oligandrum acting as a plant-systemic resistance inducer, promoting jasmonic/ethylene signaling pathways and grapevine priming. P. chlamydospora pathogenicity genes, such as those related to secondary metabolite biosynthesis, carbohydrate-active enzymes and transcription regulators, were also affected in their expression. Shifts in grapevine responses and key-fungal functions were associated with the reduction of P. chlamydospora wood necroses. This study provides evidence of wood fungal pathogen transcriptional changes induced by a root biocontrol agent, P. oligandrum, in which there is no contact between the two microorganisms.

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Claims 7

Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Pythium oligandrum colonization of grapevine roots significantly reduced wood necroses caused by Phaeomoniella chlamydospora.

Taxon
grapevineVitise1
Treatment
P. oligandrum colonizes grapevine rootse1
Interactor
P. chlamydosporaPhaeomoniella chlamydosporae1pathogen
Second interactor
P. oligandrumPythium oligandrume1biocontrol_agent
Outcome
wood necrosese1
Direction
reducede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Vitis
Vitis · Taxon · picture of the genus (one of its species)Victor M. Vicente Selvas · Public domain · Wikimedia Commons ↗
Pythium oligandrum
Pythium oligandrum · Second interactorLordboldemort · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“When P. oligandrum colonizes grapevine roots, it was observed that the wood necroses caused by P. chlamydospora were significantly reduced”

✓ located verbatim in the source · abstract, characters 346–484 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Following P. oligandrum root colonization, major transcriptomic changes occurred in the grapevine-defense system.

Taxon
grapevineVitise1
Treatment
P. oligandrum-root colonizatione1
Outcome
major transcriptomic changese1

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Vitis
Vitis · Taxon · picture of the genus (one of its species)Victor M. Vicente Selvas · Public domain · Wikimedia Commons ↗

Verbatim

e1

“Following P. oligandrum-root colonization, major transcriptomic changes occurred both, in the grapevine-defense system and in the P. chlamydospore-virulence factors”

✓ located verbatim in the source · abstract, characters 690–854 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Following P. oligandrum root colonization, major transcriptomic changes occurred in the virulence factors of Phaeomoniella chlamydospora, which had no contact with P. oligandrum.

Taxon
grapevineVitise1
Treatment
P. oligandrum-root colonizatione1
Interactor
P. chlamydosporee1pathogen
Second interactor
P. oligandrumPythium oligandrume1biocontrol_agent
Outcome
virulence factorse1
Qualifier
there is no contact between the two microorganismse2

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Vitis
Vitis · Taxon · picture of the genus (one of its species)Victor M. Vicente Selvas · Public domain · Wikimedia Commons ↗
Pythium oligandrum
Pythium oligandrum · Second interactorLordboldemort · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“Following P. oligandrum-root colonization, major transcriptomic changes occurred both, in the grapevine-defense system and in the P. chlamydospore-virulence factors”

✓ located verbatim in the source · abstract, characters 690–854 · show in text ↑
e2

“in which there is no contact between the two microorganisms”

✓ located verbatim in the source · abstract, characters 1513–1572 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Grapevine defence was enhanced in response to Phaeomoniella chlamydospora attacks.

Taxon
grapevineVitise1
Interactor
P. chlamydosporaPhaeomoniella chlamydosporae1pathogen
Outcome
Grapevine-defensee1
Direction
enhancede1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Vitis
Vitis · Taxon · picture of the genus (one of its species)Victor M. Vicente Selvas · Public domain · Wikimedia Commons ↗

Verbatim

e1

“Grapevine-defense was enhanced in response to P. chlamydospora attacks”

✓ located verbatim in the source · abstract, characters 856–926 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

Pythium oligandrum acts as a plant-systemic resistance inducer in grapevine, promoting jasmonic/ethylene signalling pathways and grapevine priming.

Taxon
grapevineVitise1
Interactor
P. oligandrumPythium oligandrume1biocontrol_agent
Outcome
jasmonic/ethylene signaling pathwayse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Vitis
Vitis · Taxon · picture of the genus (one of its species)Victor M. Vicente Selvas · Public domain · Wikimedia Commons ↗
Pythium oligandrum
Pythium oligandrum · InteractorLordboldemort · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“P. oligandrum acting as a plant-systemic resistance inducer, promoting jasmonic/ethylene signaling pathways and grapevine priming”

✓ located verbatim in the source · abstract, characters 933–1062 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Following P. oligandrum root colonization, pathogenicity genes of Phaeomoniella chlamydospora (secondary metabolite biosynthesis, carbohydrate-active enzymes, transcription regulators) were affected in expression.

Taxon
grapevineVitise1
Treatment
P. oligandrum-root colonizatione1
Interactor
P. chlamydosporaPhaeomoniella chlamydosporae2pathogen
Outcome
pathogenicity genese2

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Vitis
Vitis · Taxon · picture of the genus (one of its species)Victor M. Vicente Selvas · Public domain · Wikimedia Commons ↗

Verbatim

e1

“Following P. oligandrum-root colonization, major transcriptomic changes occurred both, in the grapevine-defense system and in the P. chlamydospore-virulence factors”

✓ located verbatim in the source · abstract, characters 690–854 · show in text ↑
e2

“P. chlamydospora pathogenicity genes, such as those related to secondary metabolite biosynthesis, carbohydrate-active enzymes and transcription regulators, were also affected in their expression”

✓ located verbatim in the source · abstract, characters 1064–1258 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Shifts in grapevine responses and key fungal functions were associated with reduced wood necroses caused by Phaeomoniella chlamydospora.

Taxon
grapevineVitise1
Interactor
P. chlamydosporaPhaeomoniella chlamydosporae1pathogen
Outcome
wood necrosese1
Direction
reductione1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Vitis
Vitis · Taxon · picture of the genus (one of its species)Victor M. Vicente Selvas · Public domain · Wikimedia Commons ↗

Verbatim

e1

“Shifts in grapevine responses and key-fungal functions were associated with the reduction of P. chlamydospora wood necroses”

✓ located verbatim in the source · abstract, characters 1260–1383 · show in text ↑

Pythium oligandrum · Phaeomoniella chlamydospora · VitisResults agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.