Paper · 2020 · Canadian Journal of Plant Pathology

Mapping of Ug99 stem rust resistance in Canadian durum wheat

Sachin Kumar; Tom G. Fetch; Ron E. Knox; et al.

7
claims
13
verbatim quotes
9
citations
3
research areas
✓
Open access

Abstract

Stem rust, caused by Puccinia graminis f. sp. tritici (Pgt), has potential to cause major yield losses in durum wheat. Development of durum cultivars with improved resistance to stem rust is a sustainable option for effective control of this disease. This study was conducted to identify genomic regions associated with resistance to Ug99-derived Pgt races using a doubled haploid (DH) mapping population produced from a cross between the resistant experimental line A9919-BY5C and the moderately susceptible cultivar ‘Strongfield’. The parents and DH lines were phenotyped for adult plant disease severity and infection response at Njoro, Kenya, for four years, and for seedling reaction to race TTKSK in a containment facility near Morden, Canada. Composite interval mapping using 612 SNP and DArT markers indicated four significant QTL for resistance to stem rust on chromosomes 1B, 4A, 5B, and 6A. A major and stable QTL from A9919-BY5C was identified on the short arm of chromosome 6A (6AS), which accounted for 71% of variation explained for seedling resistance and up to 46% for field resistance. This QTL mapped near the Sr8 locus and may be Sr8155B1, or a novel gene at the same location. Another QTL for adult plant resistance from A9919-BY5C was mapped on chromosome 1B that explained up to 14% of the phenotypic variation and likely is Sr14. Two minor QTL were identified in ‘Strongfield’ on chromosomes 4A and 5B that were inconsistent over years. Markers associated with the 6AS and 1B QTL can be used to proactively stack resistance to Ug99-derived races of Pgt into Canadian durum wheat.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 7

Observationobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Four significant stem rust resistance QTL mapped to chromosomes 1B, 4A, 5B, and 6A.

Interactor
stem ruste0pathogen
Outcome
QTL for resistance to stem ruste0
Value
foure0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum turgidum subsp. durum
Triticum turgidum subsp. durum · TaxonSten Porse · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“four significant QTL for resistance to stem rust on chromosomes 1B, 4A, 5B, and 6A”

✓ located verbatim in the source · abstract, characters 818–900 · show in text ↑
t0

“durum wheat”

✓ located verbatim in the source · title, characters 49–60 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

The 6AS QTL explained 71% of seedling resistance variation.

Material
A9919-BY5Ce0
Gene
QTLe0
Outcome
variation explained for seedling resistancee0
Value
71%e0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum turgidum subsp. durum
Triticum turgidum subsp. durum · TaxonSten Porse · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A major and stable QTL from A9919-BY5C was identified on the short arm of chromosome 6A (6AS), which accounted for 71% of variation explained for seedling resistance and up to 46% for field resistance”

✓ located verbatim in the source · abstract, characters 902–1102 · show in text ↑
t0

“durum wheat”

✓ located verbatim in the source · title, characters 49–60 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

The same 6AS QTL explained up to 46% of field resistance variation.

Material
A9919-BY5Ce0
Gene
QTLe0
Outcome
field resistancee0
Value
46%e0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum turgidum subsp. durum
Triticum turgidum subsp. durum · TaxonSten Porse · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“A major and stable QTL from A9919-BY5C was identified on the short arm of chromosome 6A (6AS), which accounted for 71% of variation explained for seedling resistance and up to 46% for field resistance”

✓ located verbatim in the source · abstract, characters 902–1102 · show in text ↑
t0

“durum wheat”

✓ located verbatim in the source · title, characters 49–60 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

The 6AS QTL mapped near Sr8 and might be Sr8155B1 or a novel gene.

Gene
Sr8e0
Outcome
QTL mapped near the Sr8 locuse0
Qualifier
may be Sr8155B1, or a novel gene at the same locatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum turgidum subsp. durum
Triticum turgidum subsp. durum · TaxonSten Porse · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“This QTL mapped near the Sr8 locus and may be Sr8155B1, or a novel gene at the same location”

✓ located verbatim in the source · abstract, characters 1104–1196 · show in text ↑
t0

“durum wheat”

✓ located verbatim in the source · title, characters 49–60 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

The A9919-BY5C chromosome 1B QTL explained up to 14% of adult plant resistance variation.

Material
A9919-BY5Ce0
Gene
QTLe0
Outcome
phenotypic variatione0
Value
14%e0
Qualifier
likely is Sr14e0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum turgidum subsp. durum
Triticum turgidum subsp. durum · TaxonSten Porse · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Another QTL for adult plant resistance from A9919-BY5C was mapped on chromosome 1B that explained up to 14% of the phenotypic variation and likely is Sr14”

✓ located verbatim in the source · abstract, characters 1198–1352 · show in text ↑
t0

“durum wheat”

✓ located verbatim in the source · title, characters 49–60 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Two minor Strongfield QTL on chromosomes 4A and 5B were inconsistent across years.

Material
Strongfielde0
Outcome
minor QTLe0
Value
Twoe0
Qualifier
inconsistent over yearse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum turgidum subsp. durum
Triticum turgidum subsp. durum · TaxonSten Porse · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Two minor QTL were identified in ‘Strongfield’ on chromosomes 4A and 5B that were inconsistent over years”

✓ located verbatim in the source · abstract, characters 1354–1459 · show in text ↑
t0

“durum wheat”

✓ located verbatim in the source · title, characters 49–60 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors proposed using markers for the 6AS and 1B QTL to stack resistance.

Interactor
Pgte0pathogen
Gene
6AS and 1B QTLe0
Outcome
proactively stack resistance to Ug99-derived races of Pgte0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum turgidum subsp. durum
Triticum turgidum subsp. durum · TaxonSten Porse · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Markers associated with the 6AS and 1B QTL can be used to proactively stack resistance to Ug99-derived races of Pgt into Canadian durum wheat”

✓ located verbatim in the source · abstract, characters 1461–1602 · show in text ↑