Paper · 2021 · Plant Disease

Isolation and Characterization of Bacteriophages Infecting Burkholderia glumae, the Major Causal Agent of Bacterial Panicle Blight in Rice

Nootjarin Jungkhun; Antonio R. G. Farias; Inderjit Barphagha; et al.

5
claims
10
verbatim quotes
9
citations
1
research areas
✓
Open access

Abstract

Bacterial panicle blight (BPB), caused by Burkholderia glumae, is one of the most severe seed-borne bacterial diseases of rice in the world, which can decrease rice production by ≤75%. Nevertheless, there are few effective measures to manage this disease. In an attempt to develop an alternative management tool for BPB, we isolated and characterized phages from soil and water that are effective to lyse several strains of B. glumae. After tests of host ranges, the phages NBP1-1, NBP4-7, and NBP4-8 were selected for further comprehensive characterization, all of which could lyse B. glumae BGLa14-8 (phage sensitive) but not B. glumae 336gr-1 (phage insensitive). This result indicates that the phages killing B. glumae cells have specific host ranges at the strain level within the bacterial species. In the greenhouse condition of this study, foliar application of the phage NBP4-7 reduced the severity of BPB caused by B. glumae BGLa14-8 ≤62% but did not cause any significant effect on the infection by B. glumae 336gr-1. Electron microscopy and whole-genome sequencing were also performed to characterize the three selected phages. Transmission electron microscopy revealed that the selected phages belong to the family Myoviridae. Furthermore, whole-genome sequence analysis indicated that the three phages belong to a same species and are closely related to the Burkholderia phage KL3, a member of the Myoviridae family.

Abstract from the paper’s OpenAlex record, shown for indexing and research. Copyright remains with the authors or the publisher. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 5

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Phages NBP1-1, NBP4-7 and NBP4-8 lysed B. glumae BGLa14-8 but not B. glumae 336gr-1

Interactor
B. glumaeBurkholderia glumaee0pathogen
Second interactor
phages NBP1-1, NBP4-7, and NBP4-8e0biocontrol_agent
Outcome
host rangese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗
Burkholderia glumae
Burkholderia glumae · InteractorFelipeveraruiz · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e4

“seed-borne bacterial diseases of rice”

✓ located verbatim in the source · abstract, characters 89–126 · show in text ↑
e0

“After tests of host ranges, the phages NBP1-1, NBP4-7, and NBP4-8 were selected for further comprehensive characterization, all of which could lyse B. glumae BGLa14-8 (phage sensitive) but not B. glumae 336gr-1 (phage insensitive)”

✓ located verbatim in the source · abstract, characters 435–665 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Foliar application of phage NBP4-7 reduced BPB severity caused by B. glumae BGLa14-8 by up to 62% in the greenhouse

Treatment
foliar application of the phage NBP4-7e1
Interactor
B. glumae BGLa14-8Burkholderia glumaee1pathogen
Second interactor
NBP4-7e1biocontrol_agent
Outcome
severity of BPBe1
Direction
reducede1
Value
≤62%e1
Setting
greenhouse conditione1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗
Burkholderia glumae
Burkholderia glumae · InteractorFelipeveraruiz · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e4

“seed-borne bacterial diseases of rice”

✓ located verbatim in the source · abstract, characters 89–126 · show in text ↑
e1

“In the greenhouse condition of this study, foliar application of the phage NBP4-7 reduced the severity of BPB caused by B. glumae BGLa14-8 ≤62% but did not cause any significant effect on the infection by B. glumae 336gr-1”

✓ located verbatim in the source · abstract, characters 805–1027 · show in text ↑
Intervention effectobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

Foliar application of phage NBP4-7 did not significantly affect infection by B. glumae 336gr-1 in the greenhouse

Treatment
foliar application of the phage NBP4-7e1
Interactor
B. glumae 336gr-1Burkholderia glumaee1pathogen
Second interactor
NBP4-7e1biocontrol_agent
Outcome
infection by B. glumae 336gr-1e1
Direction
no_changeinferrede1
Setting
greenhouse conditione1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗
Burkholderia glumae
Burkholderia glumae · InteractorFelipeveraruiz · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e4

“seed-borne bacterial diseases of rice”

✓ located verbatim in the source · abstract, characters 89–126 · show in text ↑
e1

“In the greenhouse condition of this study, foliar application of the phage NBP4-7 reduced the severity of BPB caused by B. glumae BGLa14-8 ≤62% but did not cause any significant effect on the infection by B. glumae 336gr-1”

✓ located verbatim in the source · abstract, characters 805–1027 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The selected phages belong to the family Myoviridae

Outcome
the selected phages belong to the family Myoviridaee2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e4

“seed-borne bacterial diseases of rice”

✓ located verbatim in the source · abstract, characters 89–126 · show in text ↑
e2

“Transmission electron microscopy revealed that the selected phages belong to the family Myoviridae”

✓ located verbatim in the source · abstract, characters 1140–1238 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The three phages belong to a same species and are closely related to Burkholderia phage KL3

Outcome
the three phages belong to a same speciese3
Qualifier
closely related to the Burkholderia phage KL3e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e4

“seed-borne bacterial diseases of rice”

✓ located verbatim in the source · abstract, characters 89–126 · show in text ↑
e3

“the three phages belong to a same species and are closely related to the Burkholderia phage KL3”

✓ located verbatim in the source · abstract, characters 1299–1394 · show in text ↑

application · Burkholderia glumae · Oryza sativa (rice)Positive and negative results

6 papers: 5 positive, 1 negative or no effect

4 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

2 papers more in this group

See all 6 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.