Paper · 2021 · Breeding Science

Effects of tall alleles SD1-in and SD1-ja to the dwarfing allele sd1-d originating from ‘Dee-geo-woo-gen’ on yield and related traits on the genetic background of indica IR36 in rice

Birendra Bahadur Rana; Misa Kamimukai; Mukunda Bhattarai; et al.

11
claims
22
verbatim quotes
7
citations
2
research areas
✓
Open access

Abstract

sd1-d originating from ‘Dee-geo-woo-gen’ has been utilized to develop short-culmed indica varieties adaptable to higher fertilizer-application. Its tall alleles SD1-in and SD1-ja are harbored in indica and japonica subspecies, respectively. The sd1-d of indica IR36 was substituted with SD1-in or SD1-ja by recurrent backcrossing with IR36, and two tall isogenic lines (“5867-36” and “Koshi-36”) were developed. IR36, 5867-36 and Koshi-36 were grown in a paddy field in three years, and yield and related traits were measured, the effects of SD1-in and SD1-ja on yielding ability and related characteristics were examined on the genetic background of IR 36. SD1-in decreased panicle number per m2 but increased spikelet number per panicle, ripened-grain percentage and 1000-grain weight, compared with sd1-d, resulting in the increase of yield. The increase of 1000-grain weight by SD1-in, caused by the increases of length, width and thickness of grain, was due to the increases of the length and width of lemma. SD1-ja did not significantly affect yield, mainly because the decrease of panicle number per m2 was compensated by the enlarged 1000-grain weight owing to the increase of lemma length. Serious lodging was observed in long-culmed 5867-36, suggesting that sd1-d is indispensable for indica breeding programs.

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Claims 11

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

SD1-in reduced panicle number per square metre relative to sd1-d.

Gene
SD1-ine0
Outcome
panicle number per m2e0
Direction
decreasede0
Comparator
sd1-de0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice”

✓ located verbatim in the source · title, characters 178–182 · show in text ↑
e0

“SD1-in decreased panicle number per m2 but increased spikelet number per panicle, ripened-grain percentage and 1000-grain weight, compared with sd1-d, resulting in the increase of yield.”

✓ located verbatim in the source · abstract, characters 658–844 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

SD1-in increased spikelets per panicle, ripened-grain percentage and thousand-grain weight relative to sd1-d.

Gene
SD1-ine0
Outcome
spikelet number per panicle, ripened-grain percentage and 1000-grain weighte0
Direction
increasede0
Comparator
sd1-de0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice”

✓ located verbatim in the source · title, characters 178–182 · show in text ↑
e0

“SD1-in decreased panicle number per m2 but increased spikelet number per panicle, ripened-grain percentage and 1000-grain weight, compared with sd1-d, resulting in the increase of yield.”

✓ located verbatim in the source · abstract, characters 658–844 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

SD1-in increased yield relative to sd1-d.

Gene
SD1-ine0
Outcome
yielde0
Direction
increasee0
Comparator
sd1-de0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice”

✓ located verbatim in the source · title, characters 178–182 · show in text ↑
e0

“SD1-in decreased panicle number per m2 but increased spikelet number per panicle, ripened-grain percentage and 1000-grain weight, compared with sd1-d, resulting in the increase of yield.”

✓ located verbatim in the source · abstract, characters 658–844 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

SD1-in increased grain length, width and thickness.

Gene
SD1-ine0
Outcome
length, width and thickness of graine0
Direction
increasese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice”

✓ located verbatim in the source · title, characters 178–182 · show in text ↑
e0

“The increase of 1000-grain weight by SD1-in, caused by the increases of length, width and thickness of grain, was due to the increases of the length and width of lemma.”

✓ located verbatim in the source · abstract, characters 845–1013 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

SD1-in increased lemma length and width.

Organ / stage
lemmae0
Gene
SD1-ine0
Outcome
length and width of lemmae0
Direction
increasese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice”

✓ located verbatim in the source · title, characters 178–182 · show in text ↑
e0

“The increase of 1000-grain weight by SD1-in, caused by the increases of length, width and thickness of grain, was due to the increases of the length and width of lemma.”

✓ located verbatim in the source · abstract, characters 845–1013 · show in text ↑
Observationobservedoriginal resultno effectnot significant (as stated)measured

Claim · model-written summary

SD1-ja did not significantly affect yield.

Gene
SD1-jae0
Outcome
yielde0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice”

✓ located verbatim in the source · title, characters 178–182 · show in text ↑
e0

“SD1-ja did not significantly affect yield, mainly because the decrease of panicle number per m2 was compensated by the enlarged 1000-grain weight owing to the increase of lemma length.”

✓ located verbatim in the source · abstract, characters 1014–1198 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

SD1-ja decreased panicle number per square metre.

Gene
SD1-jae0
Outcome
panicle number per m2e0
Direction
decreasee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice”

✓ located verbatim in the source · title, characters 178–182 · show in text ↑
e0

“SD1-ja did not significantly affect yield, mainly because the decrease of panicle number per m2 was compensated by the enlarged 1000-grain weight owing to the increase of lemma length.”

✓ located verbatim in the source · abstract, characters 1014–1198 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

SD1-ja enlarged thousand-grain weight.

Gene
SD1-jae0
Outcome
1000-grain weighte0
Direction
enlargede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice”

✓ located verbatim in the source · title, characters 178–182 · show in text ↑
e0

“SD1-ja did not significantly affect yield, mainly because the decrease of panicle number per m2 was compensated by the enlarged 1000-grain weight owing to the increase of lemma length.”

✓ located verbatim in the source · abstract, characters 1014–1198 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

SD1-ja increased lemma length.

Organ / stage
lemmae0
Gene
SD1-jae0
Outcome
lemma lengthe0
Direction
increasee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice”

✓ located verbatim in the source · title, characters 178–182 · show in text ↑
e0

“SD1-ja did not significantly affect yield, mainly because the decrease of panicle number per m2 was compensated by the enlarged 1000-grain weight owing to the increase of lemma length.”

✓ located verbatim in the source · abstract, characters 1014–1198 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Serious lodging occurred in the long-culmed 5867-36 line.

Material
5867-36e0
Outcome
Serious lodginge0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice”

✓ located verbatim in the source · title, characters 178–182 · show in text ↑
e0

“Serious lodging was observed in long-culmed 5867-36”

✓ located verbatim in the source · abstract, characters 1199–1250 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors conclude that sd1-d is indispensable for indica breeding programs.

Gene
sd1-de0
Outcome
indispensable for indica breeding programse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“rice”

✓ located verbatim in the source · title, characters 178–182 · show in text ↑
e0

“suggesting that sd1-d is indispensable for indica breeding programs.”

✓ located verbatim in the source · abstract, characters 1252–1320 · show in text ↑