Paper · 2021 · New Phytologist

The miR156b‐GmSPL9d module modulates nodulation by targeting multiple core nodulation genes in soybean

Jinxia Yun; Zhengxi Sun; Qiong Jiang; et al.

6
claims
9
verbatim quotes
51
citations
2
research areas
✓
Open access · cc-by-nc

Abstract

Symbiotic nodulation is initiated in the roots of legumes in response to low nitrogen and rhizobial signal molecules and is dynamically regulated by a complex regulatory network that coordinates rhizobial infection and nodule organogenesis. It has been shown that the miR156-SPL module mediates nodulation in legumes; however, conclusive evidence of how this module exerts its function during nodulation remains elusive. Here, we report that the miR156b-GmSPL9d module regulates symbiotic nodulation by targeting multiple key regulatory genes in the nodulation signalling pathway of soybean. miR156 family members are differentially expressed during nodulation, and miR156b negatively regulates nodulation by mainly targeting soybean SQUAMOSA promoter-binding protein-like 9d (GmSPL9d), a positive regulator of soybean nodulation. GmSPL9d directly binds to the miR172c promoter and activates its expression, suggesting a conserved role of GmSPL9d. Furthermore, GmSPL9d was coexpressed with the soybean nodulation marker genes nodule inception a (GmNINa) and GmENOD40-1 during nodule formation and development. Intriguingly, GmSPL9d can bind to the promoters of GmNINa and GmENOD40-1 and regulate their expression. Our data demonstrate that the miR156b-GmSPL9d module acts as an upstream master regulator of soybean nodulation, which coordinates multiple marker genes involved in soybean nodulation.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by-nc. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 6

Observationobservedoriginal resultmeasured

Claim · model-written summary

miR156 family members are differentially expressed during nodulation in soybean.

Taxon
soybeanGlycine maxt0
Organ / stage
nodulatione0
Gene
miR156e0
Outcome
differentially expressede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“miR156 family members are differentially expressed during nodulation”

✓ located verbatim in the source · abstract, characters 592–660 · show in text ↑
t0

“soybean”

✓ located verbatim in the source · title, characters 95–102 · show in text ↑
Mechanismobservedoriginal resultnegativemeasured

Claim · model-written summary

miR156b negatively regulates nodulation, mainly by targeting soybean GmSPL9d.

Taxon
soybeanGlycine maxe0
Gene
miR156be0
Outcome
nodulatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“miR156b negatively regulates nodulation by mainly targeting soybean SQUAMOSA promoter-binding protein-like 9d (GmSPL9d)”

✓ located verbatim in the source · abstract, characters 666–785 · show in text ↑
Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

GmSPL9d is a positive regulator of soybean nodulation.

Taxon
soybeanGlycine maxe0
Gene
GmSPL9de0
Outcome
nodulatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“(GmSPL9d), a positive regulator of soybean nodulation”

✓ located verbatim in the source · abstract, characters 776–829 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

GmSPL9d directly binds to the miR172c promoter and activates its expression.

Taxon
soybeanGlycine maxt0
Gene
GmSPL9de0
Outcome
binds to the miR172c promoter and activates its expressione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“GmSPL9d directly binds to the miR172c promoter and activates its expression”

✓ located verbatim in the source · abstract, characters 831–906 · show in text ↑
t0

“soybean”

✓ located verbatim in the source · title, characters 95–102 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

GmSPL9d was coexpressed with soybean nodulation marker genes GmNINa and GmENOD40-1 during nodule formation and development.

Taxon
soybeanGlycine maxe0
Organ / stage
nodule formation and developmente0
Gene
GmSPL9de0
Outcome
coexpressede0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“GmSPL9d was coexpressed with the soybean nodulation marker genes nodule inception a (GmNINa) and GmENOD40-1 during nodule formation and development”

✓ located verbatim in the source · abstract, characters 961–1108 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

GmSPL9d can bind to the promoters of GmNINa and GmENOD40-1 and regulate their expression.

Taxon
soybeanGlycine maxt0
Gene
GmSPL9de0
Outcome
bind to the promoters of GmNINa and GmENOD40-1 and regulate their expressione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“GmSPL9d can bind to the promoters of GmNINa and GmENOD40-1 and regulate their expression”

✓ located verbatim in the source · abstract, characters 1124–1212 · show in text ↑
t0

“soybean”

✓ located verbatim in the source · title, characters 95–102 · show in text ↑