Paper · 2022 · Microorganisms

Endophytic PGPR from Tomato Roots: Isolation, In Vitro Characterization and In Vivo Evaluation of Treated Tomatoes (Solanum lycopersicum L.)

Bastien Cochard; Basile Giroud; Julien Crovadore; et al.

9
claims
19
verbatim quotes
78
citations
2
research areas
✓
Open access · cc-by

Abstract

Plant-growth-promoting rhizobacteria (PGPR) are soil bacteria colonizing the rhizosphere and the rhizoplane which have an effect on plant growth through multiple chemical compounds. Rhizobacteria with beneficial effects for plants could therefore be used to reduce the dependence on synthetic chemical fertilizers in conventional agriculture. Within this study, 67 endophytic fungi and 49 bacteria were isolated from root samples from 3 different commercial productions: an off-ground tomato production in a greenhouse, an organic production and a conventional production, both in a soil tunnel. Following morphological selection, 12 fungal and 33 bacterial isolates were genetically identified. Thirteen bacterial isolates belonging to nine potential PGPR species were then applied to tomato seedlings established in sterile substrate. The ability of these bacteria to produce indole acetic acid (IAA) and solubilize phosphate was also evaluated. They all were IAA producers and solubilized phosphate. The most interesting strains for growth promotion were found to be the isolates Pseudomonas palleroniana B10, Bacillus subtilis B25, Bacillus aryabhattai B29 and Pseudomonas fluorescens B17. The isolates P. fluorescens B17, B. aryabhattai B29, B. subtilis B18 and Pseudomonas moraviensis B6 also increased root growth. This study proposed a quick protocol for isolating and testing potential endophytic PGPR that should be characterized further for the direct and indirect mechanisms of growth promotion.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

Tomato roots yielded 67 endophytic fungi and 49 bacteria.

Organ / stage
roote0e1
Outcome
endophytic fungi and 49 bacteria were isolatede0e1
Value
67 endophytic fungi and 49 bacteriae0e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“67 endophytic fungi and 49 bacteria were isolated from root samples”

✓ located verbatim in the source · abstract, characters 362–429 · show in text ↑
e1

“tomato production”

✓ located verbatim in the source · abstract, characters 485–502 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

All tested bacterial isolates produced IAA and solubilized phosphate.

Outcome
IAA producers and solubilized phosphatee0e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“They all were IAA producers and solubilized phosphate”

✓ located verbatim in the source · abstract, characters 948–1001 · show in text ↑
e1

“tomato seedlings”

✓ located verbatim in the source · abstract, characters 786–802 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Pseudomonas palleroniana B10 promoted tomato growth.

Treatment
Pseudomonas palleroniana B10e0e1
Interactor
Pseudomonas palleroniana B10Pseudomonas palleronianae0e1symbiont
Outcome
growth promotione0e1

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The most interesting strains for growth promotion were found to be the isolates Pseudomonas palleroniana B10”

✓ located verbatim in the source · abstract, characters 1003–1111 · show in text ↑
e1

“tomato seedlings”

✓ located verbatim in the source · abstract, characters 786–802 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Bacillus subtilis B25 promoted tomato growth.

Treatment
Bacillus subtilis B25e0e1
Interactor
Bacillus subtilis B25Bacillus subtilise0e1symbiont
Outcome
growth promotione0e1

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Bacillus subtilis
Bacillus subtilis · InteractorY tambe (original uploader) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“growth promotion were found to be the isolates Pseudomonas palleroniana B10, Bacillus subtilis B25, Bacillus aryabhattai B29 and Pseudomonas fluorescens B17”

✓ located verbatim in the source · abstract, characters 1036–1192 · show in text ↑
e1

“tomato seedlings”

✓ located verbatim in the source · abstract, characters 786–802 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Bacillus aryabhattai B29 promoted tomato growth.

Treatment
Bacillus aryabhattai B29e0e1
Interactor
Bacillus aryabhattai B29Priestia aryabhattaie0e1symbiont
Outcome
growth promotione0e1

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“growth promotion were found to be the isolates Pseudomonas palleroniana B10, Bacillus subtilis B25, Bacillus aryabhattai B29 and Pseudomonas fluorescens B17”

✓ located verbatim in the source · abstract, characters 1036–1192 · show in text ↑
e1

“tomato seedlings”

✓ located verbatim in the source · abstract, characters 786–802 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Pseudomonas fluorescens B17 promoted tomato growth and increased root growth.

Treatment
Pseudomonas fluorescens B17e0e1e2
Interactor
Pseudomonas fluorescens B17Pseudomonas fluorescense0e1e2symbiont
Outcome
root growthe0e1e2
Direction
increasede0e1e2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Pseudomonas fluorescens
Pseudomonas fluorescens · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“growth promotion were found to be the isolates Pseudomonas palleroniana B10, Bacillus subtilis B25, Bacillus aryabhattai B29 and Pseudomonas fluorescens B17”

✓ located verbatim in the source · abstract, characters 1036–1192 · show in text ↑
e1

“P. fluorescens B17, B. aryabhattai B29, B. subtilis B18 and Pseudomonas moraviensis B6 also increased root growth”

✓ located verbatim in the source · abstract, characters 1207–1320 · show in text ↑
e2

“tomato seedlings”

✓ located verbatim in the source · abstract, characters 786–802 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

B. aryabhattai B29 increased tomato root growth.

Treatment
B. aryabhattai B29e0e1
Interactor
B. aryabhattai B29Priestia aryabhattaie0e1symbiont
Outcome
root growthe0e1
Direction
increasede0e1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“B. aryabhattai B29, B. subtilis B18 and Pseudomonas moraviensis B6 also increased root growth”

✓ located verbatim in the source · abstract, characters 1227–1320 · show in text ↑
e1

“tomato seedlings”

✓ located verbatim in the source · abstract, characters 786–802 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

B. subtilis B18 increased tomato root growth.

Treatment
B. subtilis B18e0e1
Interactor
B. subtilis B18Bacillus subtilise0e1symbiont
Outcome
root growthe0e1
Direction
increasede0e1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Bacillus subtilis
Bacillus subtilis · InteractorY tambe (original uploader) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“B. subtilis B18 and Pseudomonas moraviensis B6 also increased root growth”

✓ located verbatim in the source · abstract, characters 1247–1320 · show in text ↑
e1

“tomato seedlings”

✓ located verbatim in the source · abstract, characters 786–802 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Pseudomonas moraviensis B6 increased tomato root growth.

Treatment
Pseudomonas moraviensis B6e0e1
Interactor
Pseudomonas moraviensis B6Pseudomonas moraviensise0e1symbiont
Outcome
root growthe0e1
Direction
increasede0e1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Pseudomonas moraviensis B6 also increased root growth”

✓ located verbatim in the source · abstract, characters 1267–1320 · show in text ↑
e1

“tomato seedlings”

✓ located verbatim in the source · abstract, characters 786–802 · show in text ↑

Bacillus subtilis · growth · Solanum lycopersicum (tomato)Positive and negative results

34 papers: 31 positive, 3 negative or no effect

30 papers in the same direction as this paper · 3 in the opposite direction

  1. no effect
  2. negative
  3. negative

30 papers more in this group

See all 34 papers →

Pseudomonas fluorescens · growth · Solanum lycopersicum (tomato)Positive and negative results

36 papers: 34 positive, 2 negative or no effect

33 papers in the same direction as this paper · 2 in the opposite direction

  1. positive
  2. no effect
  3. no effect

32 papers more in this group

See all 36 papers →

Priestia aryabhattai · growth · Solanum lycopersicum (tomato)Results agree

3 papers: 3 positive, 0 negative or no effect

2 papers in the same direction as this paper

  1. positive
  2. positive
See all 3 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.