Paper · 2011 · LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Científicas)

Evidence for the endophytic colonization of Phaseolus vulgaris(common bean) roots by the diazotroph Herbaspirillum seropedicae

Schmidt,M.A.; Souza,E.M.; Baura,V.; et al.

6
claims
11
verbatim quotes
1
citations
2
research areas
✓
Open access · other-oa

Abstract

Herbaspirillum seropedicae is an endophytic diazotrophic bacterium, which associates with important agricultural plants. In the present study, we have investigated the attachment to and internal colonization of Phaseolus vulgaris roots by the H. seropedicae wild-type strain SMR1 and by a strain of H. seropedicae expressing a red fluorescent protein (DsRed) to track the bacterium in the plant tissues. Two-day-old P. vulgaris roots were incubated at 30°C for 15 min with 6 x 10(8) CFU/mL H. seropedicae SMR1 or RAM4. Three days after inoculation, 4 x 10(4) cells of endophytic H. seropedicae SMR1 were recovered per gram of fresh root, and 9 days after inoculation the number of endophytes increased to 4 x 10(6) CFU/g. The identity of the recovered bacteria was confirmed by amplification and sequencing of the 16SrRNA gene. Furthermore, confocal microscopy of P. vulgaris roots inoculated with H. seropedicae RAM4 showed that the bacterial cells were attached to the root surface 15 min after inoculation; fluorescent bacteria were visible in the internal tissues after 24 h and were found in the central cylinder after 72 h, showing that H. seropedicae RAM4 is capable of colonizing the roots of the dicotyledon P. vulgaris. Determination of dry weight of common bean inoculated with H. seropedicae SMR1 suggested that this bacterium has a negative effect on the growth of P. vulgaris.

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Claims 6

Observationobservedoriginal resultmeasured

Claim · model-written summary

Endophytic H. seropedicae SMR1 recovery was 4 x 10(4) cells per gram of fresh root three days after inoculation.

Taxon
Phaseolus vulgarisPhaseolus vulgarise0
Organ / stage
rootse0
Interactor
H. seropedicae SMR1Herbaspirillum seropedicaee1symbiont
Outcome
cells of endophytic H. seropedicae SMR1 were recovered per gram of fresh roote1
Value
4 x 10(4) cellse1
Qualifier
Three days after inoculatione1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Phaseolus vulgaris roots”

✓ located verbatim in the source · abstract, characters 211–235 · show in text ↑
e1

“Three days after inoculation, 4 x 10(4) cells of endophytic H. seropedicae SMR1 were recovered per gram of fresh root”

✓ located verbatim in the source · abstract, characters 519–636 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Endophytic H. seropedicae abundance rose to 4 x 10(6) CFU/g nine days after inoculation.

Taxon
Phaseolus vulgarisPhaseolus vulgarise0
Interactor
H. seropedicae SMR1Herbaspirillum seropedicaee2symbiont
Outcome
number of endophytese1
Direction
increasede1
Value
4 x 10(6) CFU/ge1
Qualifier
9 days after inoculatione1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Phaseolus vulgaris roots”

✓ located verbatim in the source · abstract, characters 211–235 · show in text ↑
e1

“9 days after inoculation the number of endophytes increased to 4 x 10(6) CFU/g”

✓ located verbatim in the source · abstract, characters 642–720 · show in text ↑
e2

“endophytic H. seropedicae SMR1 were recovered”

✓ located verbatim in the source · abstract, characters 568–613 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

H. seropedicae RAM4 attached to P. vulgaris root surfaces 15 minutes after inoculation.

Taxon
P. vulgarisPhaseolus vulgarise0
Organ / stage
root surfacee0
Interactor
H. seropedicae RAM4Herbaspirillum seropedicaee0symbiont
Outcome
bacterial cells were attached to the root surfacee0
Qualifier
15 min after inoculatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“P. vulgaris roots inoculated with H. seropedicae RAM4 showed that the bacterial cells were attached to the root surface 15 min after inoculation”

✓ located verbatim in the source · abstract, characters 864–1008 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

H. seropedicae RAM4 was visible in internal P. vulgaris root tissues after 24 hours.

Taxon
P. vulgarisPhaseolus vulgarise0
Organ / stage
internal tissuese1
Interactor
H. seropedicae RAM4Herbaspirillum seropedicaee0symbiont
Outcome
fluorescent bacteria were visible in the internal tissuese1
Qualifier
after 24 he1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“P. vulgaris roots inoculated with H. seropedicae RAM4”

✓ located verbatim in the source · abstract, characters 864–917 · show in text ↑
e1

“fluorescent bacteria were visible in the internal tissues after 24 h”

✓ located verbatim in the source · abstract, characters 1010–1078 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

H. seropedicae RAM4 reached the central cylinder of P. vulgaris roots after 72 hours.

Taxon
P. vulgarisPhaseolus vulgarise0
Organ / stage
central cylindere1
Interactor
H. seropedicae RAM4Herbaspirillum seropedicaee0symbiont
Outcome
found in the central cylindere1
Qualifier
after 72 he1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“P. vulgaris roots inoculated with H. seropedicae RAM4”

✓ located verbatim in the source · abstract, characters 864–917 · show in text ↑
e1

“were found in the central cylinder after 72 h”

✓ located verbatim in the source · abstract, characters 1083–1128 · show in text ↑
Intervention effectauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

H. seropedicae SMR1 may reduce P. vulgaris dry weight.

Taxon
P. vulgarisPhaseolus vulgarise0
Treatment
inoculated with H. seropedicae SMR1e0
Interactor
H. seropedicae SMR1Herbaspirillum seropedicaee0symbiont
Outcome
dry weight of common beane0
Direction
negative effecte0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Phaseolus vulgaris
Phaseolus vulgaris · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“dry weight of common bean inoculated with H. seropedicae SMR1 suggested that this bacterium has a negative effect on the growth of P. vulgaris”

✓ located verbatim in the source · abstract, characters 1247–1389 · show in text ↑

Herbaspirillum seropedicae · growth · Phaseolus vulgaris (common bean)Results agree

2 papers: 0 positive, 2 negative or no effect

1 paper in the same direction as this paper

  1. negative
See all 2 papers →

inoculation · growth · Phaseolus vulgaris (common bean)Results differ

126 papers: 106 positive, 20 negative or no effect

19 papers in the same direction as this paper · 106 in the opposite direction

  1. positive
  2. positive
  3. positive

122 papers more in this group

See all 126 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.