Paper · 2023 · Plant Biotechnology

Suppressed expression of ErbB3-binding protein 1 (EBP1) genes compromised the hypersensitive response cell death in Nicotiana benthamiana

Maho Watanabe; Kouhei Ohnishi; Yasufumi Hikichi; et al.

6
claims
8
verbatim quotes
0
citations
2
research areas
✓
Open access · cc-by

Abstract

Target of rapamycin (TOR) regulates essential processes associated with plant growth, development, and cell death by modulating metabolic activities and translation in response to environmental signals. The ATP-competitive TOR inhibitor AZD8055 suppressed the hypersensitive response (HR) cell death in Nicotiana benthamiana infected with the incompatible Ralstonia solanacearum. The induced expression of the HR marker gene hin1 was also inhibited by the AZD8055 treatment. To further clarify the mechanisms underlying TOR-regulated HR cell death, we focused on TOR-related ErbB3-binding protein 1 (EBP1) in N. benthamiana (NbEBP1). We found four EBP1 orthologs in the N. benthamiana genome. The expression levels of all four EBP1 orthologs in N. benthamiana were up-regulated by the R. solanacearum infection. The silencing of the four NbEBP1 orthologs suppressed the induction of HR cell death, hin1 expression, and the production of reactive oxygen species. These results suggest that the TOR signaling pathway helps regulate HR cell death along with reactive oxygen species-related signaling in N. benthamiana.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 6

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

AZD8055 suppressed hypersensitive response cell death in infected N. benthamiana.

Taxon
Nicotiana benthamianaNicotiana benthamianae0
Treatment
AZD8055e0
Interactor
Ralstonia solanacearumRalstonia solanacearume0pathogen
Outcome
hypersensitive response (HR) cell deathe0
Direction
suppressede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Ralstonia solanacearum
Ralstonia solanacearum · InteractorClemson University - USDA Cooperative Extension Slide Series, Bugwood.org · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The ATP-competitive TOR inhibitor AZD8055 suppressed the hypersensitive response (HR) cell death in Nicotiana benthamiana infected with the incompatible Ralstonia solanacearum.”

✓ located verbatim in the source · abstract, characters 203–379 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

AZD8055 inhibited induced hin1 expression.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Treatment
AZD8055 treatmente0
Gene
hin1e0
Outcome
induced expression of the HR marker gene hin1e0
Direction
inhibitede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The induced expression of the HR marker gene hin1 was also inhibited by the AZD8055 treatment.”

✓ located verbatim in the source · abstract, characters 380–474 · show in text ↑
t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 116–137 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Four EBP1 orthologs were found in the N. benthamiana genome.

Taxon
N. benthamianaNicotiana benthamianae0
Gene
EBP1e0
Outcome
EBP1 orthologse0
Value
foure0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“We found four EBP1 orthologs in the N. benthamiana genome.”

✓ located verbatim in the source · abstract, characters 634–692 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

R. solanacearum infection upregulated all four EBP1 orthologs.

Taxon
N. benthamianaNicotiana benthamianae0
Treatment
R. solanacearum infectione0
Interactor
R. solanacearumRalstonia solanacearume0pathogen
Gene
EBP1e0
Outcome
expression levels of all four EBP1 orthologse0
Direction
up-regulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Ralstonia solanacearum
Ralstonia solanacearum · InteractorClemson University - USDA Cooperative Extension Slide Series, Bugwood.org · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The expression levels of all four EBP1 orthologs in N. benthamiana were up-regulated by the R. solanacearum infection.”

✓ located verbatim in the source · abstract, characters 693–811 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing NbEBP1 orthologs suppressed HR cell death, hin1 expression, and reactive oxygen species production.

Taxon
Nicotiana benthamianaNicotiana benthamianat0
Treatment
silencing of the four NbEBP1 orthologse0
Gene
NbEBP1e0
Outcome
induction of HR cell death, hin1 expression, and the production of reactive oxygen speciese0
Direction
suppressede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The silencing of the four NbEBP1 orthologs suppressed the induction of HR cell death, hin1 expression, and the production of reactive oxygen species.”

✓ located verbatim in the source · abstract, characters 812–961 · show in text ↑
t0

“Nicotiana benthamiana”

✓ located verbatim in the source · title, characters 116–137 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer TOR signaling regulates HR cell death together with reactive oxygen species signaling.

Taxon
N. benthamianaNicotiana benthamianae0
Outcome
HR cell deathe0
Qualifier
TOR signaling pathwaye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“These results suggest that the TOR signaling pathway helps regulate HR cell death along with reactive oxygen species-related signaling in N. benthamiana.”

✓ located verbatim in the source · abstract, characters 962–1115 · show in text ↑

loss of function · disease · Nicotiana benthamianaPositive and negative results

143 papers: 50 positive, 93 negative or no effect

92 papers in the same direction as this paper · 50 in the opposite direction

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