Paper · 2023 · Scientific Reports

Genome-wide analysis of heavy metal ATPases (HMAs) in Poaceae species and their potential role against copper stress in Triticum aestivum

Tuba Sharf Batool; Roohi Aslam; Alvina Gul; et al.

6
claims
11
verbatim quotes
28
citations
3
research areas
✓
Open access · cc-by

Abstract

-ATPases, also known as heavy metal ATPases (HMAs). Here, we report HMAs in eleven different Poaceae species, including wheat. Furthermore, the possible role of wheat HMAs in copper stress was investigated. BlastP searches identified 27 HMAs in wheat, and phylogenetic analysis based on the Maximum Likelihood method demonstrated a separation into four distinct clades. Conserved motif analysis, domain identification, gene structure, and transmembrane helices number were also identified for wheat HMAs using computational tools. Wheat seedlings grown hydroponically were subjected to elevated copper and demonstrated toxicity symptoms with effects on fresh weight and changes in expression of selected HMAs TaHMA7, TaHMA8, and TaHMA9 were upregulated in response to elevated copper, suggesting a role in wheat copper homeostasis. Further investigations on these heavy metal pumps can provide insight into strategies for enhancing crop heavy metal tolerance in the face of heavy metal pollution.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 6

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Wheat has 27 identified HMAs.

Gene
HMAse0
Outcome
HMAs in wheate0
Value
27e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“BlastP searches identified 27 HMAs in wheat”

✓ located verbatim in the source · abstract, characters 207–250 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Wheat HMAs separated into four clades.

Taxon
Triticum aestivumTriticum aestivumt0
Gene
HMAst1
Outcome
four distinct cladese0
Value
foure0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“phylogenetic analysis based on the Maximum Likelihood method demonstrated a separation into four distinct clades”

✓ located verbatim in the source · abstract, characters 256–368 · show in text ↑
t0

“Triticum aestivum”

✓ located verbatim in the source · title, characters 120–137 · show in text ↑
t1

“(HMAs)”

✓ located verbatim in the source · title, characters 44–50 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Elevated copper caused toxicity symptoms and affected wheat seedling fresh weight.

Organ / stage
seedlingse0
Treatment
elevated coppere0
Outcome
toxicity symptoms with effects on fresh weighte0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Wheat seedlings grown hydroponically were subjected to elevated copper and demonstrated toxicity symptoms with effects on fresh weight”

✓ located verbatim in the source · abstract, characters 531–665 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

TaHMA7 expression rose under elevated copper.

Taxon
Triticum aestivumTriticum aestivumt0
Treatment
elevated coppere0
Gene
TaHMA7e0
Outcome
TaHMA7e0
Direction
upregulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“TaHMA7, TaHMA8, and TaHMA9 were upregulated in response to elevated copper”

✓ located verbatim in the source · abstract, characters 709–783 · show in text ↑
t0

“Triticum aestivum”

✓ located verbatim in the source · title, characters 120–137 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

TaHMA8 expression rose under elevated copper.

Taxon
Triticum aestivumTriticum aestivumt0
Treatment
elevated coppere0
Gene
TaHMA8e0
Outcome
TaHMA8e0
Direction
upregulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“TaHMA7, TaHMA8, and TaHMA9 were upregulated in response to elevated copper”

✓ located verbatim in the source · abstract, characters 709–783 · show in text ↑
t0

“Triticum aestivum”

✓ located verbatim in the source · title, characters 120–137 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

TaHMA9 expression rose under elevated copper.

Taxon
Triticum aestivumTriticum aestivumt0
Treatment
elevated coppere0
Gene
TaHMA9e0
Outcome
TaHMA9e0
Direction
upregulatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“TaHMA7, TaHMA8, and TaHMA9 were upregulated in response to elevated copper”

✓ located verbatim in the source · abstract, characters 709–783 · show in text ↑
t0

“Triticum aestivum”

✓ located verbatim in the source · title, characters 120–137 · show in text ↑

copper atom · crop injury · Triticum aestivum (wheat)Results agree

3 papers: 0 positive, 3 negative or no effect

2 papers in the same direction as this paper

  1. negative
  2. no effect
See all 3 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.