Paper · 2023 · Plants

Determining Genetic Markers and Seed Compositions Related to High Test Weight in Glycine max

Zachary Shea; William M. Singer; Luciana Rosso; et al.

11
claims
21
verbatim quotes
4
citations
2
research areas
✓
Open access · cc-by

Abstract

Test weight, one of the primary indicators of soybean seed quality, is measured as the amount of soybean seeds in kilograms that can fit into one hectoliter. The price that growers receive for their soybean is dependent on test weight. Over the past 50 years, growers have observed a decreasing trend in test weight. Therefore, it is imperative to understand better the relationship between soybean test weight and other traits to enable breeders to select parental lines with high test weights in breeding programs to ensure the grower's profitability. The objectives of the study were to identify genetic markers associated with high test weight in soybean and to determine the correlation between high test weight and five important seed composition traits (protein, oil, sucrose, raffinose, and stachyose content). Maturity group IV and V germplasms from the USDA soybean germplasm collection were grown in Blacksburg and Warsaw in Virginia from 2019 to 2021 and were measured for all of the above traits. Results show that test weight values ranged from 62-77 kg/hL over the three years. Multiple single-nucleotide polymorphisms (SNPs) significantly associated with high test weight were found on chromosome (Chr.) 15 along with a couple on chromosome 14, and 11 candidate genes were found near these SNPs. Test weight was found to be significantly negatively correlated with oil content, inconsistently correlated with protein content in all environments, and negatively correlated but not significantly with all three sugars except for raffinose in Blacksburg 2019. We concluded that the genes that underlie test weight might be on chromosome 15, and the validated associated SNPs might be used to assist breeding selection of test weight. Breeders should pay special attention to test weight while selecting for high oil content in soybean due to their negative correlation.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 11

Observationobservedoriginal resultmeasured

Claim · model-written summary

Soybean test weight ranged from 62 to 77 kg/hL across three years.

Taxon
Glycine maxGlycine maxt0
Outcome
test weighte0
Value
62-77 kg/hLe0
Setting
over the three yearse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“test weight values ranged from 62-77 kg/hL over the three years”

✓ located verbatim in the source · abstract, characters 1028–1091 · show in text ↑
t0

“Glycine max”

✓ located verbatim in the source · title, characters 81–92 · show in text ↑
Associationobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Multiple SNPs on chromosome 15 were significantly associated with high soybean test weight.

Taxon
Glycine maxGlycine maxt0
Gene
single-nucleotide polymorphisms (SNPs)e0
Outcome
high test weighte0
Qualifier
chromosome (Chr.) 15e0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Multiple single-nucleotide polymorphisms (SNPs) significantly associated with high test weight were found on chromosome (Chr.) 15”

✓ located verbatim in the source · abstract, characters 1093–1222 · show in text ↑
t0

“Glycine max”

✓ located verbatim in the source · title, characters 81–92 · show in text ↑
Associationobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

A couple of SNPs on chromosome 14 were significantly associated with high soybean test weight.

Taxon
Glycine maxGlycine maxt0
Gene
chromosome 14e0
Outcome
High Test Weightt0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“along with a couple on chromosome 14”

✓ located verbatim in the source · abstract, characters 1223–1259 · show in text ↑
t0

“High Test Weight in Glycine max”

✓ located verbatim in the source · title, characters 61–92 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Eleven candidate genes were found near the test weight associated SNPs.

Taxon
Glycine maxGlycine maxt0
Gene
candidate genese0
Outcome
candidate genese0
Value
11e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“11 candidate genes were found near these SNPs”

✓ located verbatim in the source · abstract, characters 1265–1310 · show in text ↑
t0

“Glycine max”

✓ located verbatim in the source · title, characters 81–92 · show in text ↑
Associationobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Soybean test weight was significantly negatively correlated with oil content.

Taxon
Glycine maxGlycine maxt0
Outcome
Test weighte0
Direction
negatively correlatede0
Qualifier
oil contente0

Not reportedCompound

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Test weight was found to be significantly negatively correlated with oil content”

✓ located verbatim in the source · abstract, characters 1312–1392 · show in text ↑
t0

“Glycine max”

✓ located verbatim in the source · title, characters 81–92 · show in text ↑
Associationobservedoriginal resultmixedmeasured

Claim · model-written summary

Soybean test weight had inconsistent correlations with protein content across environments.

Taxon
Glycine maxGlycine maxt0
Outcome
protein contente0
Setting
all environmentse0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“inconsistently correlated with protein content in all environments”

✓ located verbatim in the source · abstract, characters 1394–1460 · show in text ↑
t0

“Glycine max”

✓ located verbatim in the source · title, characters 81–92 · show in text ↑
Associationobservedoriginal resultnegativenot significant (as stated)measured

Claim · model-written summary

Soybean test weight was negatively but nonsignificantly correlated with sucrose content.

Taxon
Glycine maxGlycine maxt0
Outcome
sugarse0
Direction
negatively correlatede0
Setting
Blacksburg 2019e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“negatively correlated but not significantly with all three sugars except for raffinose in Blacksburg 2019”

✓ located verbatim in the source · abstract, characters 1466–1571 · show in text ↑
t0

“Glycine max”

✓ located verbatim in the source · title, characters 81–92 · show in text ↑
Associationobservedoriginal resultnegativenot significant (as stated)measured

Claim · model-written summary

Soybean test weight was negatively but nonsignificantly correlated with stachyose content.

Taxon
Glycine maxGlycine maxt0
Outcome
sugarse0
Direction
negatively correlatede0
Setting
Blacksburg 2019e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“negatively correlated but not significantly with all three sugars except for raffinose in Blacksburg 2019”

✓ located verbatim in the source · abstract, characters 1466–1571 · show in text ↑
t0

“Glycine max”

✓ located verbatim in the source · title, characters 81–92 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer that genes underlying test weight may be on chromosome 15.

Taxon
Glycine maxGlycine maxt0
Gene
genese0
Outcome
test weighte0
Qualifier
chromosome 15e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“genes that underlie test weight might be on chromosome 15”

✓ located verbatim in the source · abstract, characters 1595–1652 · show in text ↑
t0

“Glycine max”

✓ located verbatim in the source · title, characters 81–92 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors suggest validated associated SNPs could assist selection for test weight.

Taxon
Glycine maxGlycine maxt0
Gene
SNPse0
Outcome
assist breeding selection of test weighte0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“validated associated SNPs might be used to assist breeding selection of test weight”

✓ located verbatim in the source · abstract, characters 1662–1745 · show in text ↑
t0

“Glycine max”

✓ located verbatim in the source · title, characters 81–92 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors advise attention to test weight when selecting soybean for high oil content.

Taxon
soybeanGlycine maxe0
Outcome
pay special attention to test weight while selecting for high oil contente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Breeders should pay special attention to test weight while selecting for high oil content in soybean due to their negative correlation”

✓ located verbatim in the source · abstract, characters 1747–1881 · show in text ↑