Paper · 2023 · Genes

Genome-Wide Identification and Characterization of the WRKY Gene Family in Cucurbita maxima

Qin Zhou; Ziqing Guo; Xiaojun Zhou; et al.

4
claims
7
verbatim quotes
6
citations
2
research areas
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Open access · cc-by

Abstract

In higher plants, WRKY transcription factors are broadly involved in a variety of life activities and play an important role in both biotic and abiotic stress responses. However, little is known about the functions of WRKY genes in the popular species, such as Cucurbita maxima (pumpkin), which is planted worldwide. In the present study, 102 CmWRKY genes were identified in the C. maxima genome. Chromosome location, multiple sequence alignment, phylogenetic analysis, and synteny analysis of the CmWRKYs were performed. Notably, we found that silencing CmWRKY22 promoted cucumber mosaic virus (CMV) infection, whereas overexpression of CmWRKY22 inhibited the CMV infection. Subsequently, an electrophoretic mobility shift assay (EMSA) confirmed that CmWRKY22 was able to bind to the W-box at the promoter of CmPR1b, which is a responsive gene of the salicylic acid (SA) signaling pathway. In summary, this study has provided a foundation for the antiviral functions of WRKY transcription factors in C. maxima.

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Claims 4

Observationobservedoriginal resultmeasured

Claim · model-written summary

The C. maxima genome contained 102 identified CmWRKY genes.

Taxon
C. maximaCucurbita maximae0
Gene
CmWRKYe0
Outcome
102 CmWRKY genese0
Value
102e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucurbita maxima
Cucurbita maxima · Taxonmikami-kun · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“102 CmWRKY genes were identified in the C. maxima genome”

✓ located verbatim in the source · abstract, characters 339–395 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing CmWRKY22 promoted CMV infection in C. maxima.

Taxon
Cucurbita maximaCucurbita maximat0
Treatment
silencing CmWRKY22e0
Interactor
cucumber mosaic virus (CMV)cucumber mosaic cucumoviruse0pathogen
Gene
CmWRKY22e0
Outcome
cucumber mosaic virus (CMV) infectione0
Direction
promotede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucurbita maxima
Cucurbita maxima · Taxonmikami-kun · CC BY 4.0 · iNaturalist ↗
cucumber mosaic cucumovirus
cucumber mosaic cucumovirus · InteractorDieterO · Public domain · Wikimedia Commons ↗

Verbatim

e0

“silencing CmWRKY22 promoted cucumber mosaic virus (CMV) infection”

✓ located verbatim in the source · abstract, characters 545–610 · show in text ↑
t0

“Cucurbita maxima”

✓ located verbatim in the source · title, characters 75–91 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Overexpression of CmWRKY22 inhibited CMV infection in C. maxima.

Taxon
Cucurbita maximaCucurbita maximat0
Treatment
overexpression of CmWRKY22e0
Interactor
CMVcucumber mosaic cucumoviruse0pathogen
Gene
CmWRKY22e0
Outcome
CMV infectione0
Direction
inhibitede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucurbita maxima
Cucurbita maxima · Taxonmikami-kun · CC BY 4.0 · iNaturalist ↗
cucumber mosaic cucumovirus
cucumber mosaic cucumovirus · InteractorDieterO · Public domain · Wikimedia Commons ↗

Verbatim

e0

“overexpression of CmWRKY22 inhibited the CMV infection”

✓ located verbatim in the source · abstract, characters 620–674 · show in text ↑
t0

“Cucurbita maxima”

✓ located verbatim in the source · title, characters 75–91 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

CmWRKY22 bound the W-box at the CmPR1b promoter.

Taxon
Cucurbita maximaCucurbita maximat0
Gene
CmWRKY22e0
Outcome
bind to the W-box at the promoter of CmPR1be0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucurbita maxima
Cucurbita maxima · Taxonmikami-kun · CC BY 4.0 · iNaturalist ↗

Verbatim

e0

“CmWRKY22 was able to bind to the W-box at the promoter of CmPR1b”

✓ located verbatim in the source · abstract, characters 752–816 · show in text ↑
t0

“Cucurbita maxima”

✓ located verbatim in the source · title, characters 75–91 · show in text ↑