Paper · 2024 · Nature Microbiology

Leaf microbiome dysbiosis triggered by T2SS-dependent enzyme secretion from opportunistic Xanthomonas pathogens

Sebastian Pfeilmeier; Anja Werz; Marine Ote; et al.

6
claims
9
verbatim quotes
60
citations
1
research areas
✓
Open access · cc-by

Abstract

In healthy plants, the innate immune system contributes to maintenance of microbiota homoeostasis, while disease can be associated with microbiome perturbation or dysbiosis, and enrichment of opportunistic plant pathogens like Xanthomonas. It is currently unclear whether the microbiota change occurs independently of the opportunistic pathogens or is caused by the latter. Here we tested if protein export through the type-2 secretion system (T2SS) by Xanthomonas causes microbiome dysbiosis in Arabidopsis thaliana in immunocompromised plants. We found that Xanthomonas strains secrete a cocktail of plant cell wall-degrading enzymes that promote Xanthomonas growth during infection. Disease severity and leaf tissue degradation were increased in A. thaliana mutants lacking the NADPH oxidase RBOHD. Experiments with gnotobiotic plants, synthetic bacterial communities and wild-type or T2SS-mutant Xanthomonas revealed that virulence and leaf microbiome composition are controlled by the T2SS. Overall, a compromised immune system in plants can enrich opportunistic pathogens, which damage leaf tissues and ultimately cause microbiome dysbiosis by facilitating growth of specific commensal bacteria.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 6

Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

Secreted plant cell wall-degrading enzymes promoted Xanthomonas growth during infection.

Taxon
XanthomonasXanthomonase0
Interactor
XanthomonasXanthomonase0pathogen
Outcome
Xanthomonas growthe0
Qualifier
plant cell wall-degrading enzymese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Xanthomonas
Xanthomonas · Taxon · picture from its Wikimedia Commons categoryHoward F. Schwartz, Colorado State University, Bugwood.org · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Xanthomonas strains secrete a cocktail of plant cell wall-degrading enzymes that promote Xanthomonas growth during infection”

✓ located verbatim in the source · abstract, characters 560–684 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Disease severity increased in Arabidopsis mutants lacking RBOHD.

Taxon
A. thalianaArabidopsis thalianae0
Material
mutants lacking the NADPH oxidase RBOHDe0
Gene
RBOHDe0
Outcome
Disease severitye0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Disease severity and leaf tissue degradation were increased in A. thaliana mutants lacking the NADPH oxidase RBOHD”

✓ located verbatim in the source · abstract, characters 686–800 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Leaf tissue degradation increased in Arabidopsis mutants lacking RBOHD.

Taxon
A. thalianaArabidopsis thalianae0
Material
mutants lacking the NADPH oxidase RBOHDe0
Gene
RBOHDe0
Outcome
leaf tissue degradatione0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Disease severity and leaf tissue degradation were increased in A. thaliana mutants lacking the NADPH oxidase RBOHD”

✓ located verbatim in the source · abstract, characters 686–800 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Xanthomonas T2SS controlled virulence in Arabidopsis.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Treatment
wild-type or T2SS-mutant Xanthomonase0
Interactor
XanthomonasXanthomonase0pathogen
Outcome
virulencee0
Comparator
T2SS-mutant Xanthomonase0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗
Xanthomonas
Xanthomonas · Interactor · picture from its Wikimedia Commons categoryHoward F. Schwartz, Colorado State University, Bugwood.org · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Experiments with gnotobiotic plants, synthetic bacterial communities and wild-type or T2SS-mutant Xanthomonas revealed that virulence and leaf microbiome composition are controlled by the T2SS”

✓ located verbatim in the source · abstract, characters 802–994 · show in text ↑
e1

“Arabidopsis thaliana in immunocompromised plants”

✓ located verbatim in the source · abstract, characters 496–544 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Xanthomonas T2SS controlled Arabidopsis leaf microbiome composition.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Treatment
wild-type or T2SS-mutant Xanthomonase0
Interactor
XanthomonasXanthomonase0pathogen
Outcome
leaf microbiome compositione0
Comparator
T2SS-mutant Xanthomonase0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗
Xanthomonas
Xanthomonas · Interactor · picture from its Wikimedia Commons categoryHoward F. Schwartz, Colorado State University, Bugwood.org · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Experiments with gnotobiotic plants, synthetic bacterial communities and wild-type or T2SS-mutant Xanthomonas revealed that virulence and leaf microbiome composition are controlled by the T2SS”

✓ located verbatim in the source · abstract, characters 802–994 · show in text ↑
e1

“Arabidopsis thaliana in immunocompromised plants”

✓ located verbatim in the source · abstract, characters 496–544 · show in text ↑
Mechanismauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

Compromised plant immunity can enrich opportunistic pathogens, leading to tissue damage and microbiome dysbiosis.

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Interactor
opportunistic pathogense0pathogen
Outcome
microbiome dysbiosise0
Qualifier
facilitating growth of specific commensal bacteriae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“a compromised immune system in plants can enrich opportunistic pathogens, which damage leaf tissues and ultimately cause microbiome dysbiosis by facilitating growth of specific commensal bacteria”

✓ located verbatim in the source · abstract, characters 1005–1200 · show in text ↑
e1

“Arabidopsis thaliana in immunocompromised plants”

✓ located verbatim in the source · abstract, characters 496–544 · show in text ↑