By organism › Bacteria › Lysobacteraceae › Xanthomonas

Observationobservedreview summarybasis n/a

Claim · model-written summary

The commentary highlights previously undiscovered Xanthomonas pathways for nutrition acquisition.

Taxon: XanthomonasXanthomonase1
Outcome: pathways for nutrition acquisitione1
Qualifier: previously undiscoverede1

Verbatim

e1
“highlights previously undiscovered Xanthomonas pathways for nutrition acquisition”
✓ located verbatim in the source · abstract, characters 61–142

Title

Engineering the bacterial nutrition strategy to control plant diseases

Muhammad Arslan Mahmood; Shahid Mansoor; Muhammad Naveed Aslam Journal of Integrative Plant Biology 2026. doi:10.1111/jipb.70169

Other claims from this paper (1)

Mechanism Xanthomonas bacteria hijack host molecular machinery through their effector proteins.

Mechanismauthor interpretationreview summarybasis n/a

Claim · model-written summary

Xanthomonas bacteria hijack host molecular machinery through their effector proteins.

Taxon: XanthomonasXanthomonase2
Outcome: hijack host molecular machinerye2
Qualifier: through their effector proteinse2

Verbatim

e2
“explains how Xanthomonas bacteria hijack host molecular machinery through their effector proteins”
✓ located verbatim in the source · abstract, characters 144–241

Title

Engineering the bacterial nutrition strategy to control plant diseases

Muhammad Arslan Mahmood; Shahid Mansoor; Muhammad Naveed Aslam Journal of Integrative Plant Biology 2026. doi:10.1111/jipb.70169

Other claims from this paper (1)

Observation The commentary highlights previously undiscovered Xanthomonas pathways for nutrition acquisition.

Intervention effectobservedoriginal resultmixedmeasured

Claim · model-written summary

In the in-vitro well diffusion test against Xanthomonas sp., 30 ppm Cu NUs formed an inhibition zone of 20.6 ± 0.94 mm, smaller than the 26.3 ± 0.47 mm of the antibiotic sulfamethoxazole positive control.

Taxon: Xanthomonas sp.Xanthomonase2
Treatment: 30 ppm concentration of Cu NUse0
Outcome: inhibition zonee0
Direction: lowerinferrede0 e1
Value: 20.6 ± 0.94 mme0
Qualifier: 26.3 ± 0.47 mme1
Comparator: the anti biotic sulfamethoxazole (positive control)e1

Verbatim

e0
“opti mized 30 ppm concentration of Cu NUs formed an inhibition zone with a diameter of 20.6 ± 0.94 mm”
✓ located verbatim in the source · abstract, characters 1161–1262

e1
“the anti biotic sulfamethoxazole (positive control) formed an inhibition zone with a diameter of 26.3 ± 0.47 mm”
✓ located verbatim in the source · abstract, characters 1279–1390

e2
“Xanthomonas sp. which cause bacterial blight in anthurium plants”
✓ located verbatim in the source · abstract, characters 659–723

Title

Green Synthesis, Characterization of Cu Nano Units and Evaluation of Anti bacterial Properties towards the Bacterial Blight Control in Anthurium andraeanum Lind under In-vitro and In-vivo Conditions

Sanka Wanaguru; Colin N. Peiris; Sriyani E. Peiris; et al. The proceedings of sliit international conference on advancements in science and humanities 2024. doi:10.54389/tgmo8823

Other claims from this paper (4)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Xanthomonas accounted for 7.4%.

Taxon: XanthomonasXanthomonase0
Outcome: Xanthomonase0
Value: 7.4%e0

Not reportedDirection

Verbatim

e0
“Xanthomonas,and Sphingomonas (7.4%) each.”
✓ located verbatim in the source · abstract, characters 992–1033

Title

Diversity of endophytic bacteria isolated from leguminous agroforestry trees in western Kenya

William Omuketi Emitaro; Fanuel Kawaka; David Mutisia Musyimi; et al. AMB Express 2024. doi:10.1186/s13568-024-01676-6

Other claims from this paper (14)

Observation Twenty-seven pure bacterial isolates were recovered from the three trees.
Observation Leaves supplied 44.4% of isolates.
Observation Stems supplied 33.3% of isolates.
Observation Roots supplied 22.2% of isolates.
Observation Isolates included Gram positive and negative rods and spherical forms.
Observation Eight closely related bacterial genera were identified.
Observation Bacillus accounted for 33.3%.
Observation Staphylococcus accounted for 22.2%.
Observation Alcaligens accounted for 11.1%.
Observation Pantoea accounted for 11.1%.
Observation Sphingomonas accounted for 7.4%.
Observation Acinetobacter accounted for 3.7%.
Observation Pseudomonas accounted for 3.7%.
Observation Bacillus endophytes were isolated from all three plants.

Mechanismobservedoriginal resultpositivemeasured

Claim · model-written summary

Secreted plant cell wall-degrading enzymes promoted Xanthomonas growth during infection.

Taxon: XanthomonasXanthomonase0
Interactor: XanthomonasXanthomonase0pathogen
Outcome: Xanthomonas growthe0
Qualifier: plant cell wall-degrading enzymese0

Verbatim

e0
“Xanthomonas strains secrete a cocktail of plant cell wall-degrading enzymes that promote Xanthomonas growth during infection”
✓ located verbatim in the source · abstract, characters 560–684

Title

Leaf microbiome dysbiosis triggered by T2SS-dependent enzyme secretion from opportunistic Xanthomonas pathogens

Sebastian Pfeilmeier; Anja Werz; Marine Ote; et al. Nature Microbiology 2024. doi:10.1038/s41564-023-01555-z

Other claims from this paper (5)

Observation Disease severity increased in Arabidopsis mutants lacking RBOHD.
Observation Leaf tissue degradation increased in Arabidopsis mutants lacking RBOHD.
Intervention effect Xanthomonas T2SS controlled virulence in Arabidopsis.
Intervention effect Xanthomonas T2SS controlled Arabidopsis leaf microbiome composition.
Mechanism Compromised plant immunity can enrich opportunistic pathogens, leading to tissue damage and microbiome dysbiosis.

Mechanismobservedreview summarybasis n/a

Claim · model-written summary

TALE repeat structure enables recognition of one nucleotide per repeat.

Taxon: XanthomonasXanthomonast0
Gene: TALEse0
Outcome: binding to DNA targetse0
Qualifier: recognition of a single nucleotide target per repeate0

Verbatim

e0
“The unique modular DNA binding domains of TALEs comprise an array of nearly identical direct repeats that enable binding to DNA targets based on the recognition of a single nucleotide target per repeat.”
✓ located verbatim in the source · abstract, characters 383–585

t0
“Xanthomonas”
✓ located verbatim in the source · title, characters 60–71

Title

The Dynamic Transcription Activator-Like Effector Family of Xanthomonas

Doron Teper; Frank F. White; Nian Wang Phytopathology 2022. doi:10.1094/phyto-10-22-0365-kd

Other claims from this paper (8)

Mechanismauthor interpretationreview summarybasis n/a

Claim · model-written summary

TALE structure and function permit gene proliferation and host counter-adaptations.

Taxon: XanthomonasXanthomonast0
Gene: TALE genese0
Outcome: proliferation of TALE genes and evolutionary adaptations in the hoste0
Qualifier: TALE structure and functione0

Verbatim

e0
“The very nature of TALE structure and function permits the proliferation of TALE genes and evolutionary adaptations in the host to counter TALE function”
✓ located verbatim in the source · abstract, characters 586–738

t0
“Xanthomonas”
✓ located verbatim in the source · title, characters 60–71

Title

The Dynamic Transcription Activator-Like Effector Family of Xanthomonas

Doron Teper; Frank F. White; Nian Wang Phytopathology 2022. doi:10.1094/phyto-10-22-0365-kd

Other claims from this paper (8)

Observationauthor interpretationreview summarybasis n/a

Claim · model-written summary

TALE genes appear relatively young and vary in presence across species.

Taxon: XanthomonasXanthomonast0
Gene: TALE genese0
Outcome: relatively young effector gene familye0
Qualifier: a presence in all virulent members of some species and absent in otherse0

Verbatim

e0
“The TALE genes appear to be a relatively young effector gene family, with a presence in all virulent members of some species and absent in others.”
✓ located verbatim in the source · abstract, characters 817–963

t0
“Xanthomonas”
✓ located verbatim in the source · title, characters 60–71

Title

The Dynamic Transcription Activator-Like Effector Family of Xanthomonas

Doron Teper; Frank F. White; Nian Wang Phytopathology 2022. doi:10.1094/phyto-10-22-0365-kd

Other claims from this paper (8)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Comparative genomics identified two unique gene clusters associated with production of bioprotectant secondary metabolites.

Taxon: XanthomonasXanthomonast0
Outcome: two unique gene clusters associated with the production of bioprotectant secondary metabolitese0

Verbatim

t0
“Novel Xanthomonas Species”
✓ located verbatim in the source · title, characters 0–25

e0
“The comparative genomics analysis also identified two unique gene clusters associated with the production of bioprotectant secondary metabolites”
✓ located verbatim in the source · abstract, characters 965–1109

Title

Novel Xanthomonas Species From the Perennial Ryegrass Seed Microbiome – Assessing the Bioprotection Activity of Non-pathogenic Relatives of Pathogens

Tongda Li; Ross Mann; Timothy Sawbridge; et al. Frontiers in Microbiology 2020. doi:10.3389/fmicb.2020.01991

Other claims from this paper (6)

Observationobservedoriginal resultmeasured

Claim · model-written summary

Genes associated with an endophytic lifestyle, such as the Type VI secretion system, were identified in the novel Xanthomonas strains.

Taxon: XanthomonasXanthomonast0
Outcome: genes associated with an endophytic lifestylee0

Not reportedDirection

Verbatim

t0
“Novel Xanthomonas Species”
✓ located verbatim in the source · title, characters 0–25

e0
“The analysis also identified genes associated with an endophytic lifestyle (e.g. Type VI secretion system)”
✓ located verbatim in the source · abstract, characters 1212–1318

Title

Novel Xanthomonas Species From the Perennial Ryegrass Seed Microbiome – Assessing the Bioprotection Activity of Non-pathogenic Relatives of Pathogens

Tongda Li; Ross Mann; Timothy Sawbridge; et al. Frontiers in Microbiology 2020. doi:10.3389/fmicb.2020.01991

Other claims from this paper (6)

Xanthomonas 32 claims

32 claims