Paper · 2024 · Frontiers in Microbiology

The impact of kaolin mining activities on bacterial diversity and community structure in the rhizosphere soil of three local plants

Wei Gao; Xiaodie Chen; Jing He; et al.

16
claims
25
verbatim quotes
5
citations
2
research areas
✓
Open access · cc-by

Abstract

Introduction Thus far, the impact of kaolin mining activities on the surrounding native plants and rhizosphere microecology has not been fully understood. Methods In this study, we used 16S rRNA high-throughput sequencing to examine the impact of kaolin mining on the rhizosphere bacterial communities and functions of three local plant species: Conyza bonariensis , Artemisia annua , and Dodonaea viscosa . Results The results showed that kaolin mining significantly reduced the diversity of rhizosphere bacteria in these plants, as indicated by the Shannon, Simpson, Chao1, and observed species indices ( p < 0.05). Kaolin mining had an impact on the recruitment of three rhizosphere bacteria native to the area: Actinoplanes , RB41 , and Mycobacterium . These bacteria were found to be more abundant in the rhizosphere soil of three local plants than in bulk soil, yet the mining of kaolin caused a decrease in their abundance ( p < 0.05). Interestingly, Ralstonia was enriched in the rhizosphere of these plants found in kaolin mining areas, suggesting its resilience to environmental stress. Furthermore, the three plants had different dominant rhizosphere bacterial populations in kaolin mining areas, such as Nocardioides , Pseudarthrobacter , and Sphingomonas , likely due to the unique microecology of the plant rhizosphere. Kaolin mining activities also caused a shift in the functional diversity of rhizosphere bacteria in the three local plants, with each plant displaying different functions to cope with kaolin mining-induced stress, such as increased abundance of the GlpM family and glucan-binding domain. Discussion This study is the first to investigate the effects of kaolin mining on the rhizosphere microecology of local plants, thus contributing to the establishment of soil microecological health monitoring indicators to better control soil pollution in kaolin mining areas.

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Claims 16

Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Mining significantly reduced rhizosphere bacterial diversity in Conyza bonariensis.

Taxon
Conyza bonariensisConyza bonariensise1
Treatment
kaolin mininge0
Outcome
diversity of rhizosphere bacteriae0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Conyza bonariensis
Conyza bonariensis · TaxonJosep Gesti · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“kaolin mining significantly reduced the diversity of rhizosphere bacteria in these plants, as indicated by the Shannon, Simpson, Chao1, and observed species indices ( p < 0.05).”

✓ located verbatim in the source · abstract, characters 440–617 · show in text ↑
e1

“Conyza bonariensis , Artemisia annua , and Dodonaea viscosa”

✓ located verbatim in the source · abstract, characters 346–405 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Mining significantly reduced rhizosphere bacterial diversity in Artemisia annua.

Taxon
Artemisia annuaArtemisia annuae1
Treatment
kaolin mininge0
Outcome
diversity of rhizosphere bacteriae0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Artemisia annua
Artemisia annua · TaxonKristian Peters -- Fabelfroh 11:39, 16 September 2007 (UTC) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“kaolin mining significantly reduced the diversity of rhizosphere bacteria in these plants, as indicated by the Shannon, Simpson, Chao1, and observed species indices ( p < 0.05).”

✓ located verbatim in the source · abstract, characters 440–617 · show in text ↑
e1

“Conyza bonariensis , Artemisia annua , and Dodonaea viscosa”

✓ located verbatim in the source · abstract, characters 346–405 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Mining significantly reduced rhizosphere bacterial diversity in Dodonaea viscosa.

Taxon
Dodonaea viscosaDodonaea viscosae1
Treatment
kaolin mininge0
Outcome
diversity of rhizosphere bacteriae0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Dodonaea viscosa
Dodonaea viscosa · TaxonForest & Kim Starr · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“kaolin mining significantly reduced the diversity of rhizosphere bacteria in these plants, as indicated by the Shannon, Simpson, Chao1, and observed species indices ( p < 0.05).”

✓ located verbatim in the source · abstract, characters 440–617 · show in text ↑
e1

“Conyza bonariensis , Artemisia annua , and Dodonaea viscosa”

✓ located verbatim in the source · abstract, characters 346–405 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Actinoplanes was more abundant in plant rhizospheres than bulk soil.

Taxon
ActinoplanesActinoplanese0
Outcome
abundante0
Direction
moree0
Comparator
bulk soile0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Actinoplanes
Actinoplanes · TaxonAgricultural Research Service (NRRL)Culture Collection · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Actinoplanes , RB41 , and Mycobacterium . These bacteria were found to be more abundant in the rhizosphere soil of three local plants than in bulk soil”

✓ located verbatim in the source · abstract, characters 715–866 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

RB41 was more abundant in plant rhizospheres than bulk soil.

Taxon
RB41e0
Outcome
abundante0
Direction
moree0
Comparator
bulk soile0

Verbatim

e0

“Actinoplanes , RB41 , and Mycobacterium . These bacteria were found to be more abundant in the rhizosphere soil of three local plants than in bulk soil”

✓ located verbatim in the source · abstract, characters 715–866 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Mycobacterium was more abundant in plant rhizospheres than bulk soil.

Taxon
MycobacteriumMycobacteriume0
Outcome
abundante0
Direction
moree0
Comparator
bulk soile0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Mycobacterium
Mycobacterium · Taxon · picture of the genus (one of its species)Public domain · Wikimedia Commons ↗

Verbatim

e0

“Actinoplanes , RB41 , and Mycobacterium . These bacteria were found to be more abundant in the rhizosphere soil of three local plants than in bulk soil”

✓ located verbatim in the source · abstract, characters 715–866 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Mining significantly decreased Actinoplanes abundance.

Taxon
ActinoplanesActinoplanese0
Treatment
mining of kaoline0
Outcome
abundancee0
Direction
decreasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Actinoplanes
Actinoplanes · TaxonAgricultural Research Service (NRRL)Culture Collection · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Actinoplanes , RB41 , and Mycobacterium . These bacteria were found to be more abundant in the rhizosphere soil of three local plants than in bulk soil, yet the mining of kaolin caused a decrease in their abundance ( p < 0.05).”

✓ located verbatim in the source · abstract, characters 715–942 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Mining significantly decreased RB41 abundance.

Taxon
RB41e0
Treatment
mining of kaoline0
Outcome
abundancee0
Direction
decreasee0

Not reportedComparator

Verbatim

e0

“Actinoplanes , RB41 , and Mycobacterium . These bacteria were found to be more abundant in the rhizosphere soil of three local plants than in bulk soil, yet the mining of kaolin caused a decrease in their abundance ( p < 0.05).”

✓ located verbatim in the source · abstract, characters 715–942 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Mining significantly decreased Mycobacterium abundance.

Taxon
MycobacteriumMycobacteriume0
Treatment
mining of kaoline0
Outcome
abundancee0
Direction
decreasee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Mycobacterium
Mycobacterium · Taxon · picture of the genus (one of its species)Public domain · Wikimedia Commons ↗

Verbatim

e0

“Actinoplanes , RB41 , and Mycobacterium . These bacteria were found to be more abundant in the rhizosphere soil of three local plants than in bulk soil, yet the mining of kaolin caused a decrease in their abundance ( p < 0.05).”

✓ located verbatim in the source · abstract, characters 715–942 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Ralstonia was enriched in mining-area plant rhizospheres, suggesting stress resilience.

Taxon
RalstoniaRalstoniae0
Outcome
enriched in the rhizospheree0
Direction
enrichede0
Qualifier
suggesting its resilience to environmental stresse0
Setting
kaolin mining arease0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ralstonia
Ralstonia · Taxon · picture of the genus (one of its species)Clemson University - USDA Cooperative Extension Slide Series, Bugwood.org · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Ralstonia was enriched in the rhizosphere of these plants found in kaolin mining areas, suggesting its resilience to environmental stress.”

✓ located verbatim in the source · abstract, characters 958–1096 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Conyza bonariensis had distinct dominant rhizosphere bacterial populations in mining areas.

Taxon
Conyza bonariensisConyza bonariensise1
Outcome
different dominant rhizosphere bacterial populationse0
Qualifier
likely due to the unique microecology of the plant rhizospheree0
Setting
kaolin mining arease0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Conyza bonariensis
Conyza bonariensis · TaxonJosep Gesti · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the three plants had different dominant rhizosphere bacterial populations in kaolin mining areas, such as Nocardioides , Pseudarthrobacter , and Sphingomonas , likely due to the unique microecology of the plant rhizosphere.”

✓ located verbatim in the source · abstract, characters 1110–1333 · show in text ↑
e1

“Conyza bonariensis , Artemisia annua , and Dodonaea viscosa”

✓ located verbatim in the source · abstract, characters 346–405 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Artemisia annua had distinct dominant rhizosphere bacterial populations in mining areas.

Taxon
Artemisia annuaArtemisia annuae1
Outcome
different dominant rhizosphere bacterial populationse0
Qualifier
likely due to the unique microecology of the plant rhizospheree0
Setting
kaolin mining arease0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Artemisia annua
Artemisia annua · TaxonKristian Peters -- Fabelfroh 11:39, 16 September 2007 (UTC) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the three plants had different dominant rhizosphere bacterial populations in kaolin mining areas, such as Nocardioides , Pseudarthrobacter , and Sphingomonas , likely due to the unique microecology of the plant rhizosphere.”

✓ located verbatim in the source · abstract, characters 1110–1333 · show in text ↑
e1

“Conyza bonariensis , Artemisia annua , and Dodonaea viscosa”

✓ located verbatim in the source · abstract, characters 346–405 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Dodonaea viscosa had distinct dominant rhizosphere bacterial populations in mining areas.

Taxon
Dodonaea viscosaDodonaea viscosae1
Outcome
different dominant rhizosphere bacterial populationse0
Qualifier
likely due to the unique microecology of the plant rhizospheree0
Setting
kaolin mining arease0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Dodonaea viscosa
Dodonaea viscosa · TaxonForest & Kim Starr · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the three plants had different dominant rhizosphere bacterial populations in kaolin mining areas, such as Nocardioides , Pseudarthrobacter , and Sphingomonas , likely due to the unique microecology of the plant rhizosphere.”

✓ located verbatim in the source · abstract, characters 1110–1333 · show in text ↑
e1

“Conyza bonariensis , Artemisia annua , and Dodonaea viscosa”

✓ located verbatim in the source · abstract, characters 346–405 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Mining shifted bacterial functional diversity in Conyza bonariensis rhizospheres.

Taxon
Conyza bonariensisConyza bonariensise1
Treatment
Kaolin mining activitiese0
Outcome
functional diversity of rhizosphere bacteriae0
Qualifier
such as increased abundance of the GlpM family and glucan-binding domaine0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Conyza bonariensis
Conyza bonariensis · TaxonJosep Gesti · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Kaolin mining activities also caused a shift in the functional diversity of rhizosphere bacteria in the three local plants, with each plant displaying different functions to cope with kaolin mining-induced stress, such as increased abundance of the GlpM family and glucan-binding domain.”

✓ located verbatim in the source · abstract, characters 1334–1621 · show in text ↑
e1

“Conyza bonariensis , Artemisia annua , and Dodonaea viscosa”

✓ located verbatim in the source · abstract, characters 346–405 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Mining shifted bacterial functional diversity in Artemisia annua rhizospheres.

Taxon
Artemisia annuaArtemisia annuae1
Treatment
Kaolin mining activitiese0
Outcome
functional diversity of rhizosphere bacteriae0
Qualifier
such as increased abundance of the GlpM family and glucan-binding domaine0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Artemisia annua
Artemisia annua · TaxonKristian Peters -- Fabelfroh 11:39, 16 September 2007 (UTC) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Kaolin mining activities also caused a shift in the functional diversity of rhizosphere bacteria in the three local plants, with each plant displaying different functions to cope with kaolin mining-induced stress, such as increased abundance of the GlpM family and glucan-binding domain.”

✓ located verbatim in the source · abstract, characters 1334–1621 · show in text ↑
e1

“Conyza bonariensis , Artemisia annua , and Dodonaea viscosa”

✓ located verbatim in the source · abstract, characters 346–405 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Mining shifted bacterial functional diversity in Dodonaea viscosa rhizospheres.

Taxon
Dodonaea viscosaDodonaea viscosae1
Treatment
Kaolin mining activitiese0
Outcome
functional diversity of rhizosphere bacteriae0
Qualifier
such as increased abundance of the GlpM family and glucan-binding domaine0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Dodonaea viscosa
Dodonaea viscosa · TaxonForest & Kim Starr · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Kaolin mining activities also caused a shift in the functional diversity of rhizosphere bacteria in the three local plants, with each plant displaying different functions to cope with kaolin mining-induced stress, such as increased abundance of the GlpM family and glucan-binding domain.”

✓ located verbatim in the source · abstract, characters 1334–1621 · show in text ↑
e1

“Conyza bonariensis , Artemisia annua , and Dodonaea viscosa”

✓ located verbatim in the source · abstract, characters 346–405 · show in text ↑