Paper · 2024 · Journal of Agricultural and Food Chemistry

Functional Identification of miR2119 Targeting ADHs in Modulating Soybean Resistance to Heterodera glycines

Xiaoyu Zhang; Xiaofeng Zhu; Lijie Chen; et al.

11
claims
18
verbatim quotes
7
citations
2
research areas
✓
Open access · cc-by-nc-nd

Abstract

High Resolution Image Download MS PowerPoint Slide Soybean cyst nematode (SCN, Heterodera glycines ) is a sedentary endoparasite nematode that results in severe economic losses in soybean crops. miRNAs play crucial roles in plant responses to nematode. However, the role of miR2119 responding to SCN stress in soybean. Here, we demonstrated that the transcript levels of polycistronic precursors containing miR2119 and miR398a were significantly reduced in soybean upon nematode infection. Promoter of the miR2119-398a precursor analysis was conducted containing a GUS reporter gene. GUS activity assays demonstrated a decrease in miR2119-398a promoter during SCN infection. Overexpression of polycistronic precursor miR2119-398a (OE-premiR2119-398a) and miR2119 precursor (OE-premiR2119) rendered soybean more susceptible to SCN. Conversely, silencing miR2119 (STTM2119) increased soybean resistance against SCN. Furthermore, RNA-seq analysis revealed that miR2119 is involved in many defense signaling pathways. GUS reporter gene assays demonstrated that miR2119 targets GmADH1.1a and GmADH1.1b . Functional analysis indicated that ADHs act as a major role in responding to H. glycines by modulating reactive oxygen species (ROS) levels. Together, the findings reveal a novel mechanism by which the polycistronic precursor miR2119–398a coordinately regulates in response to H. glycines . Additionally, miR2119 becomes an essential element contributing to H. glycines by modulating ADH activity and ROS homeostasis in soybean.

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Claims 11

Observationobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Nematode infection significantly reduced transcript levels of precursors containing miR2119 and miR398a.

Taxon
soybeanGlycine maxe0
Interactor
nematodeNematodae0pathogen
Gene
miR2119 and miR398ae0
Outcome
transcript levelse0
Direction
reducede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“transcript levels of polycistronic precursors containing miR2119 and miR398a were significantly reduced in soybean upon nematode infection.”

✓ located verbatim in the source · abstract, characters 350–489 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Soybean miR2119-398a promoter activity decreased during SCN infection.

Taxon
SoybeanGlycine maxt0
Interactor
SCNe0pathogen
Gene
miR2119-398ae0
Outcome
miR2119-398a promotere0
Direction
decreasee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“GUS activity assays demonstrated a decrease in miR2119-398a promoter during SCN infection.”

✓ located verbatim in the source · abstract, characters 584–674 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 66–73 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Overexpression of the miR2119-398a precursor increased soybean susceptibility to SCN.

Taxon
soybeanGlycine maxe0
Treatment
Overexpression of polycistronic precursor miR2119-398a (OE-premiR2119-398a)e0
Interactor
SCNe0pathogen
Outcome
susceptible to SCNe0
Direction
more susceptiblee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Overexpression of polycistronic precursor miR2119-398a (OE-premiR2119-398a) and miR2119 precursor (OE-premiR2119) rendered soybean more susceptible to SCN.”

✓ located verbatim in the source · abstract, characters 675–830 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Overexpression of the miR2119 precursor increased soybean susceptibility to SCN.

Taxon
soybeanGlycine maxe0
Treatment
miR2119 precursor (OE-premiR2119)e0
Interactor
SCNe0pathogen
Outcome
susceptible to SCNe0
Direction
more susceptiblee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Overexpression of polycistronic precursor miR2119-398a (OE-premiR2119-398a) and miR2119 precursor (OE-premiR2119) rendered soybean more susceptible to SCN.”

✓ located verbatim in the source · abstract, characters 675–830 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Silencing miR2119 increased soybean resistance against SCN.

Taxon
SoybeanGlycine maxt0
Treatment
silencing miR2119 (STTM2119)e0
Interactor
SCNe0pathogen
Outcome
soybean resistance against SCNe0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“silencing miR2119 (STTM2119) increased soybean resistance against SCN.”

✓ located verbatim in the source · abstract, characters 843–913 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 66–73 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

RNA-seq implicated miR2119 in multiple defense signaling pathways.

Taxon
SoybeanGlycine maxt0
Gene
miR2119e0
Outcome
defense signaling pathwayse0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“miR2119 is involved in many defense signaling pathways.”

✓ located verbatim in the source · abstract, characters 958–1013 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 66–73 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

GUS reporter assays showed miR2119 targets GmADH1.1a.

Taxon
SoybeanGlycine maxt0
Gene
GmADH1.1ae0
Outcome
miR2119 targets GmADH1.1ae0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“miR2119 targets GmADH1.1a and GmADH1.1b”

✓ located verbatim in the source · abstract, characters 1057–1096 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 66–73 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

GUS reporter assays showed miR2119 targets GmADH1.1b.

Taxon
SoybeanGlycine maxt0
Gene
GmADH1.1be0
Outcome
miR2119 targets GmADH1.1a and GmADH1.1be0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“miR2119 targets GmADH1.1a and GmADH1.1b”

✓ located verbatim in the source · abstract, characters 1057–1096 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 66–73 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

ADHs modulate reactive oxygen species levels in the response to H. glycines.

Taxon
SoybeanGlycine maxt0
Interactor
H. glycinesHeterodera glycinese0pathogen
Gene
ADHse0
Outcome
reactive oxygen species (ROS) levelse0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Heterodera glycines
Heterodera glycines · InteractorAgricultural Research Service · Public domain · Wikimedia Commons ↗

Verbatim

e0

“ADHs act as a major role in responding to H. glycines by modulating reactive oxygen species (ROS) levels.”

✓ located verbatim in the source · abstract, characters 1134–1239 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 66–73 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The precursor miR2119–398a coordinately regulates the response to H. glycines.

Taxon
SoybeanGlycine maxt0
Interactor
H. glycinesHeterodera glycinese0pathogen
Gene
miR2119–398ae0
Outcome
response to H. glycinese0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Heterodera glycines
Heterodera glycines · InteractorAgricultural Research Service · Public domain · Wikimedia Commons ↗

Verbatim

e0

“polycistronic precursor miR2119–398a coordinately regulates in response to H. glycines”

✓ located verbatim in the source · abstract, characters 1301–1387 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 66–73 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

miR2119 contributes to the soybean response to H. glycines by modulating ADH activity and ROS homeostasis.

Taxon
soybeanGlycine maxe0
Interactor
H. glycinesHeterodera glycinese0pathogen
Gene
miR2119e0
Outcome
ADH activity and ROS homeostasise0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗
Heterodera glycines
Heterodera glycines · InteractorAgricultural Research Service · Public domain · Wikimedia Commons ↗

Verbatim

e0

“miR2119 becomes an essential element contributing to H. glycines by modulating ADH activity and ROS homeostasis in soybean.”

✓ located verbatim in the source · abstract, characters 1404–1527 · show in text ↑

loss of function · disease · Glycine max (soybean)Positive and negative results

37 papers: 17 positive, 20 negative or no effect

16 papers in the same direction as this paper · 20 in the opposite direction

  1. negative
  2. negative
  3. negative

33 papers more in this group

See all 37 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.