Paper · 2025 · Journal of Tropical Biodiversity and Biotechnology

From Bean to Biosphere: Vegetation Dynamics and Biodiversity in Arabica Coffee Agroforestry at Ijen Geopark

Nilasari Dewi; Agung Sih Kurnianto

14
claims
17
verbatim quotes
0
citations
3
research areas
✓
Open access

Abstract

This study evaluates vegetation biodiversity and ecological conditions at the Bondowoso Biosite of Kebun Kopi, Ijen Geopark, to support sustainable Arabica coffee production. Three agroforestry plots (KR1-3) and a plantation plot (PN) were analyzed for species composition. In KR1, Acacia auriculiformis (IVI=110) and Trema orientalis (IVI=190) are prominent. KR2 is dominated by A. auriculiformis (IVI=160) and Ricinus communis (IVI=80), while Casuarina equisetifolia is significant in KR3. The PN plot shows a more even IVI distribution between Falcataria mollucana and Grevillea robusta. Tukey's test reveals significant differences between KR1 and PN, and KR2 and PN plots (p-adj=0.001). The highest existence values are Anisoptera marginata (66.67%) in KR1, T. orientalis (53.33%) in KR2, C. equisetifolia (46.67%) in KR3, and Toona sureni (26.67%) in PN. Results indicate significant variations in species diversity, evenness, and dominance across plots, influenced by ecological, geographical, and anthropogenic factors. Higher Shannon-Wiener and Evenness indices in KR1 and KR2 suggest diverse species compositions are vital for ecosystem health, while KR3's dominance of few species highlights the need for biodiversity conservation. This research recommends regenerative Arabica coffee farming practices and sustainable conservation strategies at the Bondowoso Biosite of Kebun Kopi.

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Claims 14

Observationobservedoriginal resultmeasured

Claim · model-written summary

Trema orientalis had an importance value of 190 in plot KR1.

Taxon
Trema orientalisTrema orientalee1
Outcome
IVIe1
Value
IVI=190e1
Setting
KR1e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trema orientale
Trema orientale · TaxonForest & Kim Starr · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e1

“In KR1, Acacia auriculiformis (IVI=110) and Trema orientalis (IVI=190) are prominent”

✓ located verbatim in the source · abstract, characters 274–358 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Acacia auriculiformis had an importance value of 110 in plot KR1.

Taxon
Acacia auriculiformisAcacia auriculiformise1
Outcome
IVIe1
Value
IVI=110e1
Setting
KR1e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Acacia auriculiformis
Acacia auriculiformis · TaxonMargaret Donald · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

e1

“In KR1, Acacia auriculiformis (IVI=110) and Trema orientalis (IVI=190) are prominent”

✓ located verbatim in the source · abstract, characters 274–358 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Acacia auriculiformis dominated plot KR2 with an importance value of 160.

Taxon
A. auriculiformisAcacia auriculiformise2
Outcome
IVIe2
Value
IVI=160e2
Qualifier
dominatede2
Setting
KR2e2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Acacia auriculiformis
Acacia auriculiformis · TaxonMargaret Donald · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

e2

“KR2 is dominated by A. auriculiformis (IVI=160) and Ricinus communis (IVI=80), while Casuarina equisetifolia is significant in KR3”

✓ located verbatim in the source · abstract, characters 360–490 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Ricinus communis had an importance value of 80 in plot KR2.

Taxon
Ricinus communisRicinus communise2
Outcome
IVIe2
Value
IVI=80e2
Setting
KR2e2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ricinus communis
Ricinus communis · TaxonDvellakat · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e2

“KR2 is dominated by A. auriculiformis (IVI=160) and Ricinus communis (IVI=80), while Casuarina equisetifolia is significant in KR3”

✓ located verbatim in the source · abstract, characters 360–490 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Casuarina equisetifolia was significant in plot KR3.

Taxon
Casuarina equisetifoliaCasuarina equisetifoliae2
Outcome
significante2
Setting
KR3e2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Casuarina equisetifolia
Casuarina equisetifolia · TaxonEthel Aardvark · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e2

“KR2 is dominated by A. auriculiformis (IVI=160) and Ricinus communis (IVI=80), while Casuarina equisetifolia is significant in KR3”

✓ located verbatim in the source · abstract, characters 360–490 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The importance value distribution in plot PN was more even between Falcataria mollucana and Grevillea robusta.

Taxon
Falcataria mollucanae3
Outcome
IVI distributione3
Direction
more evene3
Comparator
Grevillea robustae3
Setting
PN plote3

Verbatim

e3

“The PN plot shows a more even IVI distribution between Falcataria mollucana and Grevillea robusta”

✓ located verbatim in the source · abstract, characters 492–589 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Tukey test showed significant differences in vegetation between KR1 and PN and between KR2 and PN plots (p-adj=0.001).

Taxon
Arabica CoffeeCoffea arabicat0
Outcome
significant differencese4
Qualifier
p-adj=0.001e4
Comparator
PN plotse4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea arabica
Coffea arabica · TaxonMarcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabica Coffee Agroforestry”

✓ located verbatim in the source · title, characters 64–91 · show in text ↑
e4

“Tukey's test reveals significant differences between KR1 and PN, and KR2 and PN plots (p-adj=0.001)”

✓ located verbatim in the source · abstract, characters 591–690 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Anisoptera marginata had the highest existence value (66.67%) in plot KR1.

Taxon
Anisoptera marginataAnisoptera marginatae5
Outcome
existence valuese5
Value
66.67%e5
Setting
KR1e5

Verbatim

e5

“The highest existence values are Anisoptera marginata (66.67%) in KR1, T. orientalis (53.33%) in KR2, C. equisetifolia (46.67%) in KR3, and Toona sureni (26.67%) in PN”

✓ located verbatim in the source · abstract, characters 692–859 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Trema orientalis had an existence value of 53.33% in plot KR2.

Taxon
T. orientalisTrema orientalee5
Outcome
existence valuese5
Value
53.33%e5
Setting
KR2e5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Trema orientale
Trema orientale · TaxonForest & Kim Starr · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e5

“The highest existence values are Anisoptera marginata (66.67%) in KR1, T. orientalis (53.33%) in KR2, C. equisetifolia (46.67%) in KR3, and Toona sureni (26.67%) in PN”

✓ located verbatim in the source · abstract, characters 692–859 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Casuarina equisetifolia had an existence value of 46.67% in plot KR3.

Taxon
C. equisetifoliaCasuarina equisetifoliae5
Outcome
existence valuese5
Value
46.67%e5
Setting
KR3e5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Casuarina equisetifolia
Casuarina equisetifolia · TaxonEthel Aardvark · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e5

“The highest existence values are Anisoptera marginata (66.67%) in KR1, T. orientalis (53.33%) in KR2, C. equisetifolia (46.67%) in KR3, and Toona sureni (26.67%) in PN”

✓ located verbatim in the source · abstract, characters 692–859 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Toona sureni had an existence value of 26.67% in the plantation plot PN.

Taxon
Toona sureniToona surenie5
Outcome
existence valuese5
Value
26.67%e5
Setting
PNe5

Verbatim

e5

“The highest existence values are Anisoptera marginata (66.67%) in KR1, T. orientalis (53.33%) in KR2, C. equisetifolia (46.67%) in KR3, and Toona sureni (26.67%) in PN”

✓ located verbatim in the source · abstract, characters 692–859 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Shannon-Wiener and evenness indices were higher in plots KR1 and KR2.

Taxon
Arabica CoffeeCoffea arabicat0
Outcome
Shannon-Wiener and Evenness indicese6
Direction
Highere6
Setting
KR1 and KR2e6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea arabica
Coffea arabica · TaxonMarcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabica Coffee Agroforestry”

✓ located verbatim in the source · title, characters 64–91 · show in text ↑
e6

“Higher Shannon-Wiener and Evenness indices in KR1 and KR2 suggest diverse species compositions are vital for ecosystem health”

✓ located verbatim in the source · abstract, characters 1028–1153 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors recommend regenerative Arabica coffee farming practices.

Taxon
Arabica coffeeCoffea arabicae0
Outcome
regenerative Arabica coffee farming practicese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea arabica
Coffea arabica · TaxonMarcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“This research recommends regenerative Arabica coffee farming practices and sustainable conservation strategies at the Bondowoso Biosite of Kebun Kopi”

✓ located verbatim in the source · abstract, characters 1243–1392 · show in text ↑
Observationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Plot KR3 is dominated by few species, which highlights the need for biodiversity conservation.

Taxon
Arabica CoffeeCoffea arabicat0
Outcome
dominance of few speciese7
Setting
KR3e7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Coffea arabica
Coffea arabica · TaxonMarcelo Corrêa · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Arabica Coffee Agroforestry”

✓ located verbatim in the source · title, characters 64–91 · show in text ↑
e7

“KR3's dominance of few species highlights the need for biodiversity conservation”

✓ located verbatim in the source · abstract, characters 1161–1241 · show in text ↑