Paper · 2025 · Frontiers in Microbiology

Bioprospecting of novel silica solubilizing bacteria as bioinoculants for sustainable silica management

Elina Maharjan; Sonam Mahawar; Surya Chauhan; et al.

13
claims
16
verbatim quotes
2
citations
4
research areas
✓
Open access · cc-by

Abstract

Silicon (Si) is important quasi-essential element, important for growth and productivity in plants by abetting abiotic and biotic stresses. In the recent times intensive cultivation in India has led to depletion of available Si in soils leads stagnation in the crop productivity. In this study, out of 88 rhizobacterial isolates, 24 potential isolates having significant silica solubilizing capability and exhibited plant growth-promoting characteristics were characterized at biochemical and molecular level and further to study their effect on plant growth stimulation and augment the absorption and accumulation of active silica in plants. In qualitative method, all 24 SiS-RB isolates were able to form clear zone of silica solubilization with the solubilizing index (SSI) in the range of 1.05–3.40 cm, whereas in quantitative silica solubilization the solubilized silica was observed in a range of 1.29–43.29 ppm. The 24 SiS-RB isolates further demonstrated plant growth promoting activities. Subsequently, these isolates were evaluated for their capacity to solubilize various minerals, including biotite, calc silicate, feldspar, muscovite, orthoclase, and quartzite, revealing that only six isolates had significant solubilization ability. The six potent isolates viz. SSB-2, SSB-8, SSB-11, SSB-12, SSB-21, and SSB-24 showed a considerable enhancement in maize plant development under in vitro conditions, including improved antioxidant properties such as catalase (CAT), superoxide dismutase (SOD), peroxidase (POD), polyphenol oxidase (PPO), and phenylalanine ammonia lyase (PAL) activities. All 24 SiS-RB were subsequently analyzed for genetic diversity using amplified ribosomal DNA restriction analysis (ARDRA) analysis, and findings revealed that considerable higher genetic diversity exists among SiS-RB isolates. The integrated dendrogram exhibited similarity indices between 0.11 and 0.90, with a mean of 0.51. All potent silica-solubilizing plant growth-promoting rhizobacterial isolates were identified using 16S rDNA sequencing and belongs to Enterobacter sp., Serratia surfactantfaciens , and Klebsiella sp. These influential isolates would significantly enhance silicate management through Si based biofertilizer development for plant growth promotion under Si deficient soils.

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Claims 13

Observationobservedoriginal resultmeasured

Claim · model-written summary

All 24 SiS-RB isolates formed silica solubilization clear zones with indices of 1.05–3.40 cm.

Taxon
SiS-RBe0
Outcome
solubilizing index (SSI)e0
Value
1.05–3.40 cme0

Not reportedDirection

Verbatim

e0

“In qualitative method, all 24 SiS-RB isolates were able to form clear zone of silica solubilization with the solubilizing index (SSI) in the range of 1.05–3.40 cm”

✓ located verbatim in the source · abstract, characters 643–805 · show in text ↑

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Observationobservedoriginal resultmeasured

Claim · model-written summary

Quantitative solubilized silica ranged from 1.29–43.29 ppm.

Taxon
SiS-RBe1
Outcome
solubilized silicae0
Value
1.29–43.29 ppme0

Not reportedDirection

Verbatim

e0

“whereas in quantitative silica solubilization the solubilized silica was observed in a range of 1.29–43.29 ppm.”

✓ located verbatim in the source · abstract, characters 807–918 · show in text ↑
e1

“all 24 SiS-RB isolates were able to form clear zone of silica solubilization”

✓ located verbatim in the source · abstract, characters 666–742 · show in text ↑

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Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

The 24 SiS-RB isolates demonstrated plant growth promoting activities.

Taxon
SiS-RBe0
Outcome
plant growth promoting activitiese0

Verbatim

e0

“The 24 SiS-RB isolates further demonstrated plant growth promoting activities.”

✓ located verbatim in the source · abstract, characters 919–997 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Only six isolates significantly solubilized the tested minerals.

Taxon
SiS-RBe1
Outcome
significant solubilization abilitye0
Value
sixe0
Qualifier
biotite, calc silicate, feldspar, muscovite, orthoclase, and quartzitee0

Verbatim

e0

“Subsequently, these isolates were evaluated for their capacity to solubilize various minerals, including biotite, calc silicate, feldspar, muscovite, orthoclase, and quartzite, revealing that only six isolates had significant solubilization ability.”

✓ located verbatim in the source · abstract, characters 998–1247 · show in text ↑
e1

“The 24 SiS-RB isolates further demonstrated plant growth promoting activities.”

✓ located verbatim in the source · abstract, characters 919–997 · show in text ↑

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Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The six potent isolates considerably enhanced maize development in vitro.

Taxon
maizeZea mayse0
Treatment
SSB-2, SSB-8, SSB-11, SSB-12, SSB-21, and SSB-24e0
Interactor
SSB-2, SSB-8, SSB-11, SSB-12, SSB-21, and SSB-24e0symbiont
Outcome
plant developmente0
Direction
enhancemente0
Setting
in vitro conditionse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The six potent isolates viz. SSB-2, SSB-8, SSB-11, SSB-12, SSB-21, and SSB-24 showed a considerable enhancement in maize plant development under in vitro conditions”

✓ located verbatim in the source · abstract, characters 1248–1412 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The potent isolates improved maize catalase, superoxide dismutase, and peroxidase activities.

Taxon
maizeZea mayse0
Treatment
six potent isolatese0
Interactor
SSB-2, SSB-8, SSB-11, SSB-12, SSB-21, and SSB-24e0symbiont
Gene
catalase (CAT), superoxide dismutase (SOD), peroxidase (POD)e0
Outcome
antioxidant propertiese0
Direction
improvede0
Setting
in vitro conditionse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The six potent isolates viz. SSB-2, SSB-8, SSB-11, SSB-12, SSB-21, and SSB-24 showed a considerable enhancement in maize plant development under in vitro conditions, including improved antioxidant properties such as catalase (CAT), superoxide dismutase (SOD), peroxidase (POD), polyphenol oxidase (PPO), and phenylalanine ammonia lyase (PAL) activities.”

✓ located verbatim in the source · abstract, characters 1248–1601 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The potent isolates improved maize polyphenol oxidase and phenylalanine ammonia lyase activities.

Taxon
maizeZea mayse0
Treatment
six potent isolatese0
Interactor
SSB-2, SSB-8, SSB-11, SSB-12, SSB-21, and SSB-24e0symbiont
Gene
polyphenol oxidase (PPO), and phenylalanine ammonia lyase (PAL)e0
Outcome
activitiese0
Direction
improvede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The six potent isolates viz. SSB-2, SSB-8, SSB-11, SSB-12, SSB-21, and SSB-24 showed a considerable enhancement in maize plant development under in vitro conditions, including improved antioxidant properties such as catalase (CAT), superoxide dismutase (SOD), peroxidase (POD), polyphenol oxidase (PPO), and phenylalanine ammonia lyase (PAL) activities.”

✓ located verbatim in the source · abstract, characters 1248–1601 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ARDRA revealed considerable genetic diversity among SiS-RB isolates.

Taxon
SiS-RBe0
Outcome
genetic diversitye0
Direction
highere0

Verbatim

e0

“All 24 SiS-RB were subsequently analyzed for genetic diversity using amplified ribosomal DNA restriction analysis (ARDRA) analysis, and findings revealed that considerable higher genetic diversity exists among SiS-RB isolates.”

✓ located verbatim in the source · abstract, characters 1602–1828 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The bacterial dendrogram had similarity indices from 0.11 to 0.90, averaging 0.51.

Taxon
SiS-RBe1
Outcome
similarity indicese0
Value
between 0.11 and 0.90e0
Qualifier
with a mean of 0.51e0

Not reportedDirection

Verbatim

e0

“The integrated dendrogram exhibited similarity indices between 0.11 and 0.90, with a mean of 0.51.”

✓ located verbatim in the source · abstract, characters 1829–1927 · show in text ↑
e1

“considerable higher genetic diversity exists among SiS-RB isolates”

✓ located verbatim in the source · abstract, characters 1761–1827 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Sequencing identified potent isolates as Enterobacter sp.

Taxon
Enterobacter sp.Enterobactere0
Outcome
identified using 16S rDNA sequencinge0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Enterobacter
Enterobacter · Taxon · picture of the genus (one of its species)Public domain · Wikimedia Commons ↗

Verbatim

e0

“All potent silica-solubilizing plant growth-promoting rhizobacterial isolates were identified using 16S rDNA sequencing and belongs to Enterobacter sp., Serratia surfactantfaciens , and Klebsiella sp.”

✓ located verbatim in the source · abstract, characters 1928–2128 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Sequencing identified potent isolates as Serratia surfactantfaciens.

Taxon
Serratia surfactantfaciensSerratia surfactantfaciense0
Outcome
identified using 16S rDNA sequencinge0

Verbatim

e0

“All potent silica-solubilizing plant growth-promoting rhizobacterial isolates were identified using 16S rDNA sequencing and belongs to Enterobacter sp., Serratia surfactantfaciens , and Klebsiella sp.”

✓ located verbatim in the source · abstract, characters 1928–2128 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Sequencing identified potent isolates as Klebsiella sp.

Taxon
Klebsiella sp.Klebsiellae0
Outcome
identified using 16S rDNA sequencinge0

Verbatim

e0

“All potent silica-solubilizing plant growth-promoting rhizobacterial isolates were identified using 16S rDNA sequencing and belongs to Enterobacter sp., Serratia surfactantfaciens , and Klebsiella sp.”

✓ located verbatim in the source · abstract, characters 1928–2128 · show in text ↑
Recommendationauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The authors propose the isolates for Si biofertilizer development to promote plants in Si deficient soils.

Taxon
plante0
Outcome
Si based biofertilizer developmente0
Qualifier
under Si deficient soilse0

Verbatim

e0

“These influential isolates would significantly enhance silicate management through Si based biofertilizer development for plant growth promotion under Si deficient soils.”

✓ located verbatim in the source · abstract, characters 2129–2299 · show in text ↑