Paper · 2025 · IEEE Control Systems Letters

The Incoherent Feedback Loop of the Nitrate Acquisition in Plant Roots

Franco Blanchini; Daniele Casagrande; Nicola Tomasi; et al.

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verbatim quotes
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citations
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research areas
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Open access · cc-by

Abstract

In this paper we consider the high–affinity nitrate acquisition in plant roots. This process is governed by a mechanism including two loops of opposite signs we call Incoherent FeedBack (IFB) loop. A positive feedback loop acting in the short term, increases the intake when the roots are exposed to nitrate. An additional negative loop drastically reduces the acquisition in the long run by inhibiting the synthesis of transporters. We propose a model that fits nicely the experimental data. We investigate about the robustness of the model proving its structural stability, namely, stability for all possible parameters under some technical assumptions. We compare our model to the well known Incoherent FeedForward (IFF) loop which is a very popular network motif.

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Claims 5

Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

High-affinity nitrate acquisition in plant roots is governed by two feedback loops of opposite signs, termed the Incoherent FeedBack loop.

Taxon
Plant Rootst0
Outcome
nitrate acquisitione0
Qualifier
two loops of opposite signse1

Verbatim

t0

“Nitrate Acquisition in Plant Roots”

✓ located verbatim in the source · title, characters 36–70 · show in text ↑
e0

“nitrate acquisition in plant roots”

✓ located verbatim in the source · abstract, characters 44–78 · show in text ↑
e1

“This process is governed by a mechanism including two loops of opposite signs we call Incoherent FeedBack (IFB) loop”

✓ located verbatim in the source · abstract, characters 80–196 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The positive feedback loop acting in the short term increases nitrate intake when roots are exposed to nitrate.

Taxon
Plant Rootst0
Outcome
intakee2
Qualifier
A positive feedback loop acting in the short terme2

Verbatim

t0

“Nitrate Acquisition in Plant Roots”

✓ located verbatim in the source · title, characters 36–70 · show in text ↑
e2

“A positive feedback loop acting in the short term, increases the intake when the roots are exposed to nitrate”

✓ located verbatim in the source · abstract, characters 198–307 · show in text ↑
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The negative feedback loop reduces nitrate acquisition in the long run by inhibiting transporter synthesis.

Taxon
Plant Rootst0
Outcome
acquisitione3
Qualifier
inhibiting the synthesis of transporterse3

Verbatim

t0

“Nitrate Acquisition in Plant Roots”

✓ located verbatim in the source · title, characters 36–70 · show in text ↑
e3

“An additional negative loop drastically reduces the acquisition in the long run by inhibiting the synthesis of transporters”

✓ located verbatim in the source · abstract, characters 309–432 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

The proposed model fits the experimental data well.

Outcome
fits nicelye4
Comparator
the experimental datae4

Verbatim

e4

“We propose a model that fits nicely the experimental data”

✓ located verbatim in the source · abstract, characters 434–491 · show in text ↑
Method / resourceobservedoriginal resultpositivesimulated

Claim · model-written summary

The model is structurally stable for all possible parameters under some technical assumptions.

Outcome
structural stabilitye5
Qualifier
under some technical assumptionse5
Comparator
all possible parameterse5

Verbatim

e5

“proving its structural stability, namely, stability for all possible parameters under some technical assumptions”

✓ located verbatim in the source · abstract, characters 542–654 · show in text ↑