Paper · 2020 · Digitalen Hochschulbibliothek Sachsen-Anhalt (Universitäts- und Landesbibliothek Sachsen-Anhalt)

Analysis of crossover events and Allele segregation distortion in interspecific citrus hybrids by single pollen genotyping

Garavello, Miguel; Cuenca, José; Dreissig, Steven; et al.

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verbatim quotes
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citations
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Open access · cc-by

Abstract

In citrus, a classical method of studying crossovers and segregation distortion (SD) is the genetic analysis of progenies. A new strategy combining fluorescence-activated cell sorting and whole genome amplification of haploid pollen nuclei with a large set of molecular markers, offers the opportunity to efficiently determine the frequency of crossovers and the identification of SD without the need to generate segregating populations. Here we have analyzed meiotic crossover events in a pollen nuclei population from “Eureka” lemon and the allelic SD was evaluated in a pollen nuclei population from a clementine × sweet orange hybrid (“CSO”). Data obtained from the “CSO” pollen nuclei population were compared to those obtained from genotyping of a segregating population (“RTSO”) arising from a hand-made sexual hybridization between diploid non apomictic selected tangor (mandarin × sweet orange; “RTO” tangor) as female parent pollinated with “CSO” tangor as male parent. The analysis of crossovers rates on chromosome 1 revealed the presence of up to five crossovers events on one arm and four on the corresponding other arm, with an average of 1.97 crossovers per chromosome while no crossover events were observed in five “Eureka” lemon pollen nuclei. The rate of SD observed in “CSO” pollen nuclei (13.8%) was slightly lower than that recovered in the “RTSO” population (20.7%). In the pollen nuclei population, SD was found on linkage group (LG) 2, while the “RTSO” population showed SD on LGs 2 and 7. Potential male gametic selection mechanisms were distinguished in pollen grains, while in the population, mechanisms of gametophytic selection and/or zygotic selection were observed. This methodology is a very useful tool to facilitate research focused on the reproductive biology of citrus and study the mechanisms that affect crossovers and SD.

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Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

Chromosome 1 showed up to five crossovers on one arm and four on the other.

Taxon
citrusCitrust0
Outcome
crossovers eventse0
Value
five crossovers events on one arm and four on the corresponding other arme0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“up to five crossovers events on one arm and four on the corresponding other arm”

✓ located verbatim in the source · abstract, characters 1054–1133 · show in text ↑
t0

“citrus hybrids”

✓ located verbatim in the source · title, characters 80–94 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Average crossovers per chromosome were 1.97.

Taxon
citrusCitrust0
Outcome
crossovers per chromosomee0
Value
1.97 crossovers per chromosomee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“an average of 1.97 crossovers per chromosome”

✓ located verbatim in the source · abstract, characters 1140–1184 · show in text ↑
t0

“citrus hybrids”

✓ located verbatim in the source · title, characters 80–94 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Five Eureka lemon pollen nuclei had no observed crossover events.

Taxon
“Eureka” lemone0
Material
“Eureka” lemone0
Outcome
crossover eventse0
Value
fivee0

Verbatim

e0

“no crossover events were observed in five “Eureka” lemon pollen nuclei”

✓ located verbatim in the source · abstract, characters 1191–1261 · show in text ↑
t0

“citrus hybrids”

✓ located verbatim in the source · title, characters 80–94 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Segregation distortion was 13.8% in CSO pollen, slightly lower than 20.7% in RTSO progeny.

Taxon
citrusCitrust0
Material
“CSO”e0
Outcome
rate of SDe0
Direction
slightly lowere0
Value
13.8%e0
Qualifier
20.7%e0
Comparator
“RTSO” populatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The rate of SD observed in “CSO” pollen nuclei (13.8%) was slightly lower than that recovered in the “RTSO” population (20.7%)”

✓ located verbatim in the source · abstract, characters 1263–1389 · show in text ↑
t0

“citrus hybrids”

✓ located verbatim in the source · title, characters 80–94 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Segregation distortion in CSO pollen was found on linkage group 2.

Taxon
citrusCitrust0
Outcome
SD was found on linkage group (LG) 2e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In the pollen nuclei population, SD was found on linkage group (LG) 2”

✓ located verbatim in the source · abstract, characters 1391–1460 · show in text ↑
t0

“citrus hybrids”

✓ located verbatim in the source · title, characters 80–94 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Segregation distortion in RTSO progeny was found on linkage groups 2 and 7.

Taxon
citrusCitrust0
Material
“RTSO”e0
Outcome
SD on LGs 2 and 7e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the “RTSO” population showed SD on LGs 2 and 7”

✓ located verbatim in the source · abstract, characters 1468–1514 · show in text ↑
t0

“citrus hybrids”

✓ located verbatim in the source · title, characters 80–94 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The pollen data distinguished possible male gametic selection mechanisms.

Taxon
citrusCitrust0
Organ / stage
pollen grainse0
Outcome
Potential male gametic selection mechanismse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Potential male gametic selection mechanisms were distinguished in pollen grains”

✓ located verbatim in the source · abstract, characters 1516–1595 · show in text ↑
t0

“citrus hybrids”

✓ located verbatim in the source · title, characters 80–94 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The progeny showed gametophytic and/or zygotic selection mechanisms.

Taxon
citrusCitrust0
Outcome
mechanisms of gametophytic selection and/or zygotic selectione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“mechanisms of gametophytic selection and/or zygotic selection were observed”

✓ located verbatim in the source · abstract, characters 1622–1697 · show in text ↑
t0

“citrus hybrids”

✓ located verbatim in the source · title, characters 80–94 · show in text ↑
Method / resourceobservedoriginal resultpositivebasis n/a

Claim · model-written summary

Single pollen genotyping was useful for research on citrus reproductive biology and segregation distortion.

Taxon
citrusCitruse0
Outcome
very useful toole0

Not reportedValue

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Citrus
Citrus · Taxon · picture of the genus (one of its species)Ellen Levy Finch ( Elf ) · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“This methodology is a very useful tool to facilitate research focused on the reproductive biology of citrus and study the mechanisms that affect crossovers and SD”

✓ located verbatim in the source · abstract, characters 1699–1861 · show in text ↑