Paper · 2026 · Биофизика / Biophysics

Dynamics of SIX Gene Expression in Virulence-Contrasting F. oxysporum Strains during the Development of Flax Plant (Linum usitatissimum) Infection

M.P. Bankin; T.A. Rozhinna; M.G. Samsonova

7
claims
13
verbatim quotes
0
citations
2
research areas
—
Not open access

Abstract

Flax (Linum usitatissimum L.) is a valuable agricultural crop, an important source of fiber and seeds necessary for industry and agriculture. The imperfect ascomycete Fusarium oxysporum is one of the most dangerous pathogens of flax. In the process of coevolution with plants, Fusarium oxysporum has developed several strategies at the molecular level to ensure successful infection. One such strategy is the use of small SIX effector proteins that facilitate infection and influence the host's immune response. In our work, we investigated the relationship between the expression patterns of DIM2 methyltransferase, five SIX genes, and the virulence level in three contrasting Folini strains: highly virulent M139, medium-virulent F476, and weakly virulent F200. We found that Folini infection releases genes SIX1 and SIX13, which are exclusively associated with the parasitic stage of development, and genes whose activity is increased outside the plant in M139: SIX7ab, SIX10, SIX12ab. The greatest difference in the expression of SIX genes between the resistant and susceptible varieties was observed on the 5th day after inoculation with a highly virulent strain for the SIX12 and SIX13 genes, determining their possible role in the formation of the protective response of the resistant variety. We found a unique pattern of changes in the expression of the DIM2 DNA methyltransferase gene, with a high level at an early stage of infection development and a sharp drop on the seventh day. DIM2 activity also significantly differed between contrasting flax varieties in the early and late stages of infection.

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Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

Folini infection releases SIX1 and SIX13, which are exclusively associated with the parasitic stage of development.

Taxon
Linum usitatissimumLinum usitatissimumt0
Interactor
Folinie0pathogen
Gene
SIX1 and SIX13e0
Outcome
exclusively associated with the parasitic stage of developmente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Linum usitatissimum
Linum usitatissimum · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Folini infection releases genes SIX1 and SIX13, which are exclusively associated with the parasitic stage of development”

✓ located verbatim in the source · abstract, characters 778–898 · show in text ↑
t0

“Linum usitatissimum”

✓ located verbatim in the source · title, characters 116–135 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

SIX7ab, SIX10 and SIX12ab show increased activity outside the plant in strain M139.

Taxon
Linum usitatissimumLinum usitatissimumt0
Material
M139e0
Gene
SIX7ab, SIX10, SIX12abe0
Outcome
activity is increased outside the plante0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Linum usitatissimum
Linum usitatissimum · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“genes whose activity is increased outside the plant in M139: SIX7ab, SIX10, SIX12ab”

✓ located verbatim in the source · abstract, characters 904–987 · show in text ↑
t0

“Linum usitatissimum”

✓ located verbatim in the source · title, characters 116–135 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The greatest difference in SIX gene expression between resistant and susceptible varieties was on day 5 after inoculation with the highly virulent strain, for SIX12 and SIX13.

Taxon
Linum usitatissimumLinum usitatissimumt0
Gene
SIX12 and SIX13e0
Outcome
expression of SIX genese0
Direction
greatest differencee0
Qualifier
on the 5th day after inoculation with a highly virulent straine0
Comparator
resistant and susceptible varietiese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Linum usitatissimum
Linum usitatissimum · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The greatest difference in the expression of SIX genes between the resistant and susceptible varieties was observed on the 5th day after inoculation with a highly virulent strain for the SIX12 and SIX13 genes”

✓ located verbatim in the source · abstract, characters 989–1197 · show in text ↑
t0

“Linum usitatissimum”

✓ located verbatim in the source · title, characters 116–135 · show in text ↑
Mechanismhypothesisoriginal resultmeasured

Claim · model-written summary

SIX12 and SIX13 may play a role in forming the protective response of the resistant variety.

Taxon
Linum usitatissimumLinum usitatissimumt0
Outcome
protective response of the resistant varietye0
Qualifier
possible role in the formation of the protective responsee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Linum usitatissimum
Linum usitatissimum · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“determining their possible role in the formation of the protective response of the resistant variety”

✓ located verbatim in the source · abstract, characters 1199–1299 · show in text ↑
t0

“Linum usitatissimum”

✓ located verbatim in the source · title, characters 116–135 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

DIM2 DNA methyltransferase gene expression was at a high level at an early stage of infection development.

Taxon
Linum usitatissimumLinum usitatissimumt0
Organ / stage
early stage of infection developmente0
Gene
DIM2 DNA methyltransferase genee0
Outcome
expressione0
Direction
high levele0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Linum usitatissimum
Linum usitatissimum · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“a unique pattern of changes in the expression of the DIM2 DNA methyltransferase gene, with a high level at an early stage of infection development and a sharp drop on the seventh day”

✓ located verbatim in the source · abstract, characters 1310–1492 · show in text ↑
t0

“Linum usitatissimum”

✓ located verbatim in the source · title, characters 116–135 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

DIM2 DNA methyltransferase gene expression dropped sharply on the seventh day of infection.

Taxon
Linum usitatissimumLinum usitatissimumt0
Organ / stage
seventh daye0
Gene
DIM2 DNA methyltransferase genee0
Outcome
expressione0
Direction
sharp drope0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Linum usitatissimum
Linum usitatissimum · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“a unique pattern of changes in the expression of the DIM2 DNA methyltransferase gene, with a high level at an early stage of infection development and a sharp drop on the seventh day”

✓ located verbatim in the source · abstract, characters 1310–1492 · show in text ↑
t0

“Linum usitatissimum”

✓ located verbatim in the source · title, characters 116–135 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

DIM2 activity differed significantly between contrasting flax varieties in the early and late stages of infection.

Organ / stage
early and late stages of infectione0
Gene
DIM2e0
Outcome
DIM2 activitye0
Comparator
contrasting flax varietiese0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Linum usitatissimum
Linum usitatissimum · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“DIM2 activity also significantly differed between contrasting flax varieties in the early and late stages of infection”

✓ located verbatim in the source · abstract, characters 1494–1612 · show in text ↑